Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1232 |
Symbol | |
ID | 8398021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1315798 |
End bp | 1316745 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644995577 |
Product | L-lactate dehydrogenase |
Protein accession | YP_003152977 |
Protein GI | 257066721 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00828905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAATA GAAATAAAGT TGTCTTGATA GGGGATGGTT TTGTAGGAAG CTCCTACGCT TTTGCTCTTG TAAACTCAAC CCTTGCAAGT GAGCTTGTAA TTATAGATAT AAGAAAAGAT AAGGAAGTAG CCGATGTCAA CGACCTTTTG GATGCTACAG TCCTAACATC ATCTGCAACC ATCGTTAGAA GTGGAAGTTA CGAAGATTGC AAAGACGCTG ACCTTGTAGT ACTCGCCTAT GGAAATAGCC AGAAAAATCT CGTAAATAGG CTTGATGATA TCAAGATTGC AACAGAAATG GTCCTAGATA CAGTTCCAAA AGTTGTAGAA AATGGCTACG ACGGGGTAAT CCTTCTTGCA ACAAATCCAG TTGATGTTAT AGCAAGGGTT GTTGAGGAAG TTTCAGGTTT TCCTTTTGAA AGAATCGTAG GAACTGGAAC TAGCCTTGAC TCAGCAAGAT TTGCCCAATA TCTCGCCCTT GAAACAGGCT TTAATGTAGC TGATATCAAT GCTTATGTTA TAGGTGAGCA TGGCAACTCT TCTGTTGCTG TTTGGTCAAA TGCCAATATT AATGGGATTG GAATCGATCA ATTTATCGAC AATATAGACG ATTCCTACAA GGATAAGGTA GGAGAGATGA TTAGAGATAA GGCCTTTAGG ATTATTAAGG GCAAGGGTGC AACTCACTTT GGTATAGCTA ATTGTCTTCT AGCCTTTACA AGGGCAATCC TTCTTGACGA GAAGAGAGTT CTTATGGCTT CTGCTAAGCT TAGTGGAGAG TATAAGAACG AGGGACTCTA TACAGGAGTA CCAACTGTAA TCGGCAAAAA TGGTGCAGAG AAAATCCTAG AGATGCCAAT AGATAAGAGA GAACAAGACA TGTTTGATAA GTCATGTAGG GACCTTAAGG AAAACTTCTT GCTGGCAGAT TTAAAGAAAA ATAGATAA
|
Protein sequence | MNNRNKVVLI GDGFVGSSYA FALVNSTLAS ELVIIDIRKD KEVADVNDLL DATVLTSSAT IVRSGSYEDC KDADLVVLAY GNSQKNLVNR LDDIKIATEM VLDTVPKVVE NGYDGVILLA TNPVDVIARV VEEVSGFPFE RIVGTGTSLD SARFAQYLAL ETGFNVADIN AYVIGEHGNS SVAVWSNANI NGIGIDQFID NIDDSYKDKV GEMIRDKAFR IIKGKGATHF GIANCLLAFT RAILLDEKRV LMASAKLSGE YKNEGLYTGV PTVIGKNGAE KILEMPIDKR EQDMFDKSCR DLKENFLLAD LKKNR
|
| |