Gene Apre_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1232 
Symbol 
ID8398021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1315798 
End bp1316745 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content39% 
IMG OID644995577 
ProductL-lactate dehydrogenase 
Protein accessionYP_003152977 
Protein GI257066721 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01771] L-lactate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00828905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA GAAATAAAGT TGTCTTGATA GGGGATGGTT TTGTAGGAAG CTCCTACGCT 
TTTGCTCTTG TAAACTCAAC CCTTGCAAGT GAGCTTGTAA TTATAGATAT AAGAAAAGAT
AAGGAAGTAG CCGATGTCAA CGACCTTTTG GATGCTACAG TCCTAACATC ATCTGCAACC
ATCGTTAGAA GTGGAAGTTA CGAAGATTGC AAAGACGCTG ACCTTGTAGT ACTCGCCTAT
GGAAATAGCC AGAAAAATCT CGTAAATAGG CTTGATGATA TCAAGATTGC AACAGAAATG
GTCCTAGATA CAGTTCCAAA AGTTGTAGAA AATGGCTACG ACGGGGTAAT CCTTCTTGCA
ACAAATCCAG TTGATGTTAT AGCAAGGGTT GTTGAGGAAG TTTCAGGTTT TCCTTTTGAA
AGAATCGTAG GAACTGGAAC TAGCCTTGAC TCAGCAAGAT TTGCCCAATA TCTCGCCCTT
GAAACAGGCT TTAATGTAGC TGATATCAAT GCTTATGTTA TAGGTGAGCA TGGCAACTCT
TCTGTTGCTG TTTGGTCAAA TGCCAATATT AATGGGATTG GAATCGATCA ATTTATCGAC
AATATAGACG ATTCCTACAA GGATAAGGTA GGAGAGATGA TTAGAGATAA GGCCTTTAGG
ATTATTAAGG GCAAGGGTGC AACTCACTTT GGTATAGCTA ATTGTCTTCT AGCCTTTACA
AGGGCAATCC TTCTTGACGA GAAGAGAGTT CTTATGGCTT CTGCTAAGCT TAGTGGAGAG
TATAAGAACG AGGGACTCTA TACAGGAGTA CCAACTGTAA TCGGCAAAAA TGGTGCAGAG
AAAATCCTAG AGATGCCAAT AGATAAGAGA GAACAAGACA TGTTTGATAA GTCATGTAGG
GACCTTAAGG AAAACTTCTT GCTGGCAGAT TTAAAGAAAA ATAGATAA
 
Protein sequence
MNNRNKVVLI GDGFVGSSYA FALVNSTLAS ELVIIDIRKD KEVADVNDLL DATVLTSSAT 
IVRSGSYEDC KDADLVVLAY GNSQKNLVNR LDDIKIATEM VLDTVPKVVE NGYDGVILLA
TNPVDVIARV VEEVSGFPFE RIVGTGTSLD SARFAQYLAL ETGFNVADIN AYVIGEHGNS
SVAVWSNANI NGIGIDQFID NIDDSYKDKV GEMIRDKAFR IIKGKGATHF GIANCLLAFT
RAILLDEKRV LMASAKLSGE YKNEGLYTGV PTVIGKNGAE KILEMPIDKR EQDMFDKSCR
DLKENFLLAD LKKNR