| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1229 |
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| Symbol | |
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| ID | 8398018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1311939 |
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| End bp | 1313051 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644995574 |
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| Product | ABC transporter related |
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| Protein accession | YP_003152974 |
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| Protein GI | 257066718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000135939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATA ATTTTTCTAA CAAAAGTGTC GTCTTAAGAA ATGTCACAAA GTCTTATGAT
GACGAACTAG TTTTAAAAAC GGTAGATCTA ACGCTTGAAA AGGGGAAGTT TTATACCCTT
CTAGGACCAT CAGGTTGCGG AAAGACTACA ATTCTAAATA TAATAGCAGG CTTTGTCGAG
CAAACTAGTG GGGATGTATT TATAAATGGG GAGGACGTAA GTAATACTCC AGCCAATAAG
AGAAAGGTAA ATACAGTTTT CCAGAATTAT TCTCTCTTTC CTCATATGAA TGTCTACGAT
AATGTTGCCT TCGGCTTAAA TATAAAGAAG ATGGATAAGA AGCTAATCAA AGAAGAGGTC
AAAAAGGCCC TCGATATGGT AAATCTTTCT GGCTTTGAGA AAAGAAAAAT CTCACAAATG
TCAGGAGGAC AAAGGCAGAG AGTCGCCATA GCTCGTGCCA TAGTAAATCG ACCAGATGTA
CTCCTCTTAG ATGAGCCTTT GTCGGCCCTT GACATGAAGC TAAGAAAATC CATGCAGGTC
CTCCTTTCAA ATATCCAGTG GGAGCTAGGT ATTACCTTTG TCTTTGTAAC CCACGACCAG
GAAGAAGCCC TAGCCCTATC CGATGAGATT TTCGTAATGG ATAAGGGAGA AATCGTTCAA
TCAGGAACGC CTACAGATAT CTACGATGAG CCAATCAATA GGTATGTTGC AGAATTTATC
GGGGAGAGCA ATATCCTAAG TGCTGTGATG AAAGATGATT ATCTAGTAGA GTTTTCCAAC
AAGGACTTTG CCTGTGAGGA TGCAGGAATC CCTAAGGGAG AGAAGGTTGA AGTAGTTATA
AGGCCTGAAG ATATCAATGT CTCAAAGGAG AGGCAAGCAG ATATTAAGAT GAGTGTAGAC
AATGTCTTGT TTAGGGGAGT CTTCAATGAG CTAATTTGCT TCGATGAAGA TGATTTCAGG
TGGAAGATCC ATACTACCAA GAGATTTGAA GAAGGAGATG TTGTTGGAAT TTCCATAGAT
CCAAGCGATA TTCATGTAAT GAGATTTAAC GAATCAGAAG ATGATTTCGA TAAGAGAATC
GAGAAATATG CTATAGGAGA TGATGATGAA TAA
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| Protein sequence | MENNFSNKSV VLRNVTKSYD DELVLKTVDL TLEKGKFYTL LGPSGCGKTT ILNIIAGFVE
QTSGDVFING EDVSNTPANK RKVNTVFQNY SLFPHMNVYD NVAFGLNIKK MDKKLIKEEV
KKALDMVNLS GFEKRKISQM SGGQRQRVAI ARAIVNRPDV LLLDEPLSAL DMKLRKSMQV
LLSNIQWELG ITFVFVTHDQ EEALALSDEI FVMDKGEIVQ SGTPTDIYDE PINRYVAEFI
GESNILSAVM KDDYLVEFSN KDFACEDAGI PKGEKVEVVI RPEDINVSKE RQADIKMSVD
NVLFRGVFNE LICFDEDDFR WKIHTTKRFE EGDVVGISID PSDIHVMRFN ESEDDFDKRI
EKYAIGDDDE
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