Gene Apre_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1211 
Symbol 
ID8398000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1290216 
End bp1290854 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content36% 
IMG OID644995556 
Productprotein of unknown function UPF0029 
Protein accessionYP_003152956 
Protein GI257066700 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA TATTAAAAAA GTATAGGACC ATAAAGGGCT TTAAAACTAG CGAGTTCGAA 
GAGGAAAAAT CAAGATTTAT AACAAGTGCT AAATATGTAG AAAGTGAAGA AGAGGCCATT 
AGTTTTATCG AAGAGATAAA GGATAAAAAC AAGCAAGCAA CTCACAACTG CTCGGCCTAT 
ATCATAAATG AAATCCCTGA GATTAAAAGA TACTCAGACG ATGGCGAACC CCAAGGGTCT 
GCGGGCCTTC CTATGCTATC TGTCCTTGAA AAAGAAGAGG TCAGAAATAT TTGCGTTGTG 
GTTACCAGAT ATTTCGGTGG CAAGCTCTTA GGAAAAGGGG GACTTGTAAG GGCCTACACT 
AGGGGAGTTA CTGATACTGT ATCGCCCAAT ATAGTTTGTA AGAGAGAGTA TTTTGAAGTA 
GAATTAATTC ATTCGTATAC GGTGCTTGGT ATAATTGAAA ACTACCTAGC AGAAAATAAG 
CTTAAGGTCA TAGATAAGGA TTTTACTGAT TTGGTTAAGA TTAAGCTTCA TATTAGAAGC 
GAAGATTACC CAAAGATAGA AAAAGACCTT ATCAATTTAA CAAGTGCCAA TATCAAAATA 
GATGTCAAAG ATACTTTGAT GTTATTTGAA GAAAAATAG
 
Protein sequence
MTDILKKYRT IKGFKTSEFE EEKSRFITSA KYVESEEEAI SFIEEIKDKN KQATHNCSAY 
IINEIPEIKR YSDDGEPQGS AGLPMLSVLE KEEVRNICVV VTRYFGGKLL GKGGLVRAYT 
RGVTDTVSPN IVCKREYFEV ELIHSYTVLG IIENYLAENK LKVIDKDFTD LVKIKLHIRS 
EDYPKIEKDL INLTSANIKI DVKDTLMLFE EK