| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1185 |
|---|
| Symbol | |
|---|
| ID | 8397974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1263534 |
|---|
| End bp | 1264547 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644995531 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_003152931 |
|---|
| Protein GI | 257066675 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACA TGGAATTTAT GAAAAAATTT CTAGACAAGG ATATAAGTGG AGTCTATTTG
TTTGACTCTG AGGAGGACTT TCTCACTGAC TCCATTATAG AAGAAGCAAA AAATCAGGTA
AGCATCCCTG ACTTTAACTT TATAGATTTA AAGGGAGGGG AGGATTATGA AGTAATCAAA
AACTCAATAG AAACCCTGCC TGTAATGGAA GATAAGAAGA TCATTATCTT AAGAAACATA
GACCTATCCA AGGCAGGGCT TAAAAATTAC AAGGATCTTA TTGATCACTT AACAGCTGAT
ATAGACAACT TTCCAGACTA TGCTAGCTTG TTTATAATAT CAGATAATCC TCCCTTCAAG
GGGAAATTTT ATAAGAAGCT CGCTAAAACT GATTCCCTTG TGAAAATCGA AAGACTTGAT
AAAAACGAAC TAAAATCTTT TATAGGAAAG AAGTTTACAA GGGCAAATAA AAAAATCAAA
AGATCGCTTA TAGATGATAT TATAAATAGA TTCTCTTATC TAAATAAGGA TAGTGAGATA
AAATTATATG ATGTTTCCAA TACCATAGAT AAGATTATCG CAAACTCGGC AGATGAGATA
GTTAGACCAG AGGACGTAAA GGATCAGCTT GACGAGATTT TAAATCTTAA TATCTTTAAC
CTAACTGATG CTCTGTCAAG TAAGGATGGG AAAAGGTCGA TTGAAGTCTA TGAGACTATG
AGAAAATCCG GCGAAGATCT TTTTATGATC TATCATATGA TTATAAGACA AGTGAGAAAC
CTTATAGGAA TTAAATCCTT AACTAGTCGT GGCTTCAATG ATACTTTTAT ACAAAAATCC
TTGGGCATAT CTCCTTTTGA GCTAAGAAAG GTCAAGGGTT TTGCTAGAAA TTTTAGCCTA
GAAGAGCTTT TTAGCCTACA CGATACTCTC TTCGATATGG AAGTTAGACA GAAAAGCGGG
GCCTTTGATA TGGACCTAGA ACTTAAAATC CTTATAGGAA AAATTAGCAA ATAA
|
|---|
| Protein sequence | MNYMEFMKKF LDKDISGVYL FDSEEDFLTD SIIEEAKNQV SIPDFNFIDL KGGEDYEVIK
NSIETLPVME DKKIIILRNI DLSKAGLKNY KDLIDHLTAD IDNFPDYASL FIISDNPPFK
GKFYKKLAKT DSLVKIERLD KNELKSFIGK KFTRANKKIK RSLIDDIINR FSYLNKDSEI
KLYDVSNTID KIIANSADEI VRPEDVKDQL DEILNLNIFN LTDALSSKDG KRSIEVYETM
RKSGEDLFMI YHMIIRQVRN LIGIKSLTSR GFNDTFIQKS LGISPFELRK VKGFARNFSL
EELFSLHDTL FDMEVRQKSG AFDMDLELKI LIGKISK
|
|---|
| |