| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1183 |
|---|
| Symbol | |
|---|
| ID | 8397972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1262475 |
|---|
| End bp | 1263056 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644995529 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_003152929 |
|---|
| Protein GI | 257066673 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA ATAATAAAAA ATCTAAAAGC GACAGCATAC TTTATGCAAT TTGGGATTGG
GTGAAGACCA TAGGAATTGC CCTAATTATC ACCATACTTG TAAAGATGTT TATCATGGAT
GCTACTAAAG TTTCAGGAAA ATCTATGCTA AATACCCTCC ACGATGGGGA TATTCTCCTA
GTAGATAAGA TAGGAAGTAG GCTTAGAGAC TATAAAAGAG GCGATATAGT TATACTTAAA
GCACCAGATC ATCCAAATAG ACTTTATGTC AAAAGGATTA TTGGCGAAGA GGGAGATACT
ATTAAGATTG AAAATGGCAA GGTTTTTGTC AATGGACAAG CGCTTGATGA AAACTATACA
TCAATACCAG AAACAGACTC TTCAACTGAG ATTAGTGAAT GGACTTTGGG AGCTGATGAG
TTTTTTGTGA TGGGAGATAA TAGGATTCCT GGAGCAAGCA ACGATTCTAG AAGCTTCGGA
CCTATATATA AAGATAGACT TGTAGGCCAT GCCTTTGTAA GATTCTATCC GATAAATAGG
GCAGGTCTTA TAGATCACAA TCCATACCCA GATGAAGAAT AA
|
|---|
| Protein sequence | MSENNKKSKS DSILYAIWDW VKTIGIALII TILVKMFIMD ATKVSGKSML NTLHDGDILL
VDKIGSRLRD YKRGDIVILK APDHPNRLYV KRIIGEEGDT IKIENGKVFV NGQALDENYT
SIPETDSSTE ISEWTLGADE FFVMGDNRIP GASNDSRSFG PIYKDRLVGH AFVRFYPINR
AGLIDHNPYP DEE
|
|---|
| |