Gene Apre_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1170 
Symbol 
ID8397959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1251703 
End bp1252812 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content30% 
IMG OID644995517 
Productoxygen-independent coproporphyrinogen III oxidase 
Protein accessionYP_003152917 
Protein GI257066661 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACATA CATATTCCTT TTTGTCAAAA AAGTGCTATT ACTGTGATTT TTGTGCATAT 
ATGAATGTAG AAAATAGGGT TGAACCCTAT ATAAAAAATT TAATAAAGGA AATTAAGCTC 
TACCAAGAAA GACTAAATAT AGAAATAGAT ACTATTCACA TAGGTGGGGG TACTCCTTCT 
TATGTAGATG CAAAATATAT TGAAGAAATA GTAAATGAAA TAAAGAAATT TAAGATAGAG 
AAAATAAAAG AATTTACCAT AGAATGTAAT CCAAACTCTA TATCTAAGGA AAAACTAGCA 
ATCTATAAGG ATATTGGTAT CAATAGGATT TCTCTTGGTG TCCAATCTTT TGATGATGAA 
GTCTTAAAAG AAATTGGCAG AAATCATACA GCGGATATTG CCCTAAAAGA TATAGATATG 
ATCAGGGATG CTGGCTTTGA CAACTTATCC TTTGACCTCA TGCTCAATCT TCCAAGGCAA 
ACTTATAAGT CTGTTAAAAA TGAACTAGCT ATGGTAAAAA AGATTTCTCC TGAACACATA 
TCATGGTATT CTCTTATTCT AGAAGAAGGA TCAAGATTTT ATGCTTTAGA TAAAAAAGGG 
AAGCTAGGCT TGATGGAAGA TGACCTAGAG GTAGTTATAT TTTCATATCT TGTTGATAGC 
TTAGATAAAT TGGGACTTAA AAGATATGAG ATATCCAATT TTGCGAAAGC TAGTAAGGAG 
TCTATCCATA ACAAGAAATA TTGGAATATA GATGATTATA TAGCCTTTGG CCTAGGAGCT 
TCGGGATTTT TGTCTAATAA GAGATATACC AACACTAGAA ATTTTGTAAA ATATGACAAG 
GCTATTAGAG AAGCTAGGTA TCCTATCGTT TTTGAAGAAT TTATAGATAA GGATGAAAGA 
GAGAAGGAAT ATATTATCTT TAAACTTAGG GAGAGCGAGG GAATAAATCT AAGAGAATTT 
AAGGAGAAAT TTGCCTGTGA TTTCTTAGTT AAATATCAAG ATGTGATAGA AAAATTCAAG 
GACCAGGACT TTTATAAGCT TGATGATAAT TTCTATTTTA CTAAAAAAGG AATGAGTCTT 
TCCAATGAAT TCTATATTGA AATTATTTAA
 
Protein sequence
MLHTYSFLSK KCYYCDFCAY MNVENRVEPY IKNLIKEIKL YQERLNIEID TIHIGGGTPS 
YVDAKYIEEI VNEIKKFKIE KIKEFTIECN PNSISKEKLA IYKDIGINRI SLGVQSFDDE 
VLKEIGRNHT ADIALKDIDM IRDAGFDNLS FDLMLNLPRQ TYKSVKNELA MVKKISPEHI 
SWYSLILEEG SRFYALDKKG KLGLMEDDLE VVIFSYLVDS LDKLGLKRYE ISNFAKASKE 
SIHNKKYWNI DDYIAFGLGA SGFLSNKRYT NTRNFVKYDK AIREARYPIV FEEFIDKDER 
EKEYIIFKLR ESEGINLREF KEKFACDFLV KYQDVIEKFK DQDFYKLDDN FYFTKKGMSL 
SNEFYIEII