| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1161 |
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| Symbol | |
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| ID | 8397950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1242335 |
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| End bp | 1243408 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644995508 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003152908 |
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| Protein GI | 257066652 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATG ATAACTTAAT GAGAGAATGT TTCGACTTAG CCCGTAAGGG GGCAGGAAAA
GTTTTGACAA ATCCTATGGT TGGAGCAATT CTTATTAAAA ATGGAGAGAT AATAGCTAAG
GGCTATCACA AAAGCAATAC CTGCGACCAT GCAGAAATCG ATTGCTTTAA TAATCTTAAG
GAAAGCGCAG AAGGAGCTAC TCTGATAGTA AATCTCGAGC CTTGTTCCCA TTTTGGCAAG
CATCCTCCCT GTGTCGATGA AGTCATAAAA AGGAAAGTTA AAAGGGTTGT TATCGCAAAT
CTTGATACCA ATCCCAAGGT AGATGGTCTT AGCAAATTAA AGGAAGCCGG AATTGAGGTC
ATTACTGGAG TCCTAGAGGA TGAAGGAAGA AAATTAAATG AAAAGTTTTT CTTCAATATG
GAAAATAATA GACCTCTAGT AGCTTTAAAA TATGCTCAAA GCCTGGATGG GAAAATCGCT
ACAGCTTCCT TTGATTCTAA GTGGATTACT AATGAAGAAT CTAGAGCCTA TGTTCACAAA
CTAAGGAGCG AATATGACGC AATCCTAGTT GGAGCTAACA CCCTAAGGCA GGATAATCCA
AGGCTTACTT CAAGGATTGA AGGGGGAGTT AACCCTTATA GAATTATCCT TTCTGATAAG
CTTGATATTG ATAAAGACAG AGAAGTCTTT AGGGAAAATG CTGATAAGAA AACTTATATC
GCCACAATTT CTGATAAAGA TATAGATATA AATGCAGAAA TTATAAGATG TAAGGAAAAA
GACGGCAGGG TTGATCTTAA AGACTTGCTT GATAAGTTAT ACGAGAGAAA TATCGGATCA
GTTCTTGTAG AAGGAGGGTC TATCATAAAT AACTCTTTCC TAGAAGAAGA CCTAGTAGAC
AAAATCTATC AATTTATGGC TCCAATAATA GTATCGGGCC TTGATTCAAG GTCTGCTTTT
ATAGGAGAAG GGGCCAAGGT CATAAAAGAT GCCAAGAGAT TTTCCATAGA TGATATCAAA
AGATTTGGTA CTGATGTAAT GTTTGAGGTA AATAATGTTT ACAGGAATAG CTGA
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| Protein sequence | MNYDNLMREC FDLARKGAGK VLTNPMVGAI LIKNGEIIAK GYHKSNTCDH AEIDCFNNLK
ESAEGATLIV NLEPCSHFGK HPPCVDEVIK RKVKRVVIAN LDTNPKVDGL SKLKEAGIEV
ITGVLEDEGR KLNEKFFFNM ENNRPLVALK YAQSLDGKIA TASFDSKWIT NEESRAYVHK
LRSEYDAILV GANTLRQDNP RLTSRIEGGV NPYRIILSDK LDIDKDREVF RENADKKTYI
ATISDKDIDI NAEIIRCKEK DGRVDLKDLL DKLYERNIGS VLVEGGSIIN NSFLEEDLVD
KIYQFMAPII VSGLDSRSAF IGEGAKVIKD AKRFSIDDIK RFGTDVMFEV NNVYRNS
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