| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1142 |
|---|
| Symbol | |
|---|
| ID | 8397931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1228795 |
|---|
| End bp | 1229637 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995489 |
|---|
| Product | protein of unknown function zinc metallopeptidase putative |
|---|
| Protein accession | YP_003152889 |
|---|
| Protein GI | 257066633 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000282768 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGG AAGATAGAAG ACGATCTTCT AATGTCAATA GAGGATCCAA GGCTCCTATA
GCTGTAGGAG GAGGCATTGG TGGAATCGTA ATTATGCTAC TCTTATATTT TTTGGGAGTT
AATCCTAATG TAGTAACAAA CGAAAATCAA CAAGTTAACC AAAACACTCA AATAGAGTCT
AGGGAAGTTT CAAAGGAAAG AGAGAAACTA GAAGACTTCT TGTCAGTAAT ACTCGCTGAT
ACTGAAGATG TCTGGCATGA GGTGTTTAAG GAAAATGGCG GGACCTATCA CGAAGCACAG
ATGACCCTCT ATCAAGATAC AACTAAAACT GGCTGTGGTA TAGCCCAATC AAGGATGGGA
CCCTTCTATT GTCCAGTAGA TAAGACGGTA TATTTCGATG CATCCTTCTA CGATGACCTT
AAAAGTAGTT TCGGAGGTGG TGGAGACTTT GCCCTTGCCT ATGTCCTAGC TCACGAAATA
GGCCACCACG TTCAAAATGA ACTTGGTATC ATAAAACAAA CTAATGACTT AAGACAGAGA
TTGTCAGAAA CGGAATATAA CAAGGTATCT GTAGCCCAGG AACTTCAGGC AGATTATTTT
GCAGGGCTTT TCGCCTATTA TGTAAAAGAG AAGGGCTATC TTGAAGAAGG AGATATAGAA
GAGGCGATGA ATGCAGCTTC TGCAATTGGT GATGATAGGA TCCAAGAAAT GGCAGGTCGT
GATGTAGACG TTGATTCCTT CACCCACGGA TCTAGCGCCC AAAGAAAAGA AGCCTTCGAC
TTAGGCTTTA AATATCACGA TATAGATCAT TCGATGAAGT TTTTTGAGGA TTTGAATCTG
TAA
|
|---|
| Protein sequence | MKWEDRRRSS NVNRGSKAPI AVGGGIGGIV IMLLLYFLGV NPNVVTNENQ QVNQNTQIES
REVSKEREKL EDFLSVILAD TEDVWHEVFK ENGGTYHEAQ MTLYQDTTKT GCGIAQSRMG
PFYCPVDKTV YFDASFYDDL KSSFGGGGDF ALAYVLAHEI GHHVQNELGI IKQTNDLRQR
LSETEYNKVS VAQELQADYF AGLFAYYVKE KGYLEEGDIE EAMNAASAIG DDRIQEMAGR
DVDVDSFTHG SSAQRKEAFD LGFKYHDIDH SMKFFEDLNL
|
|---|
| |