Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1137 |
Symbol | |
ID | 8397925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1222907 |
End bp | 1223770 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644995483 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003152884 |
Protein GI | 257066628 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000101216 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA TAAACGAAAA TATACTTGAG TCTAGTATCT TTAAGGATGA TATAGAAATA AAAATTTTGA ATGCGAATGA GAGTTTCTTA ACTAATGAAA ATAGCTCGAG AATTCAGTTT CATCCCTTCA TATATTTTTA CTTCATAGTT GAAGGAAGTG GAACCTTCTT TATAGAGAAT GATTCAATAA AAATCAAAAA AAATGATTTG GTAATAATAA ATTCGAATAT CGGTCACAAT CTTTATGTAG ATGAAGACGA ATATGCAGTA AAAACTCTAG GATTCGGTCT AGAAAGTATT GGTCTAACTT CTCACCTAGA TGAGGTCCAA TCCGAAGAAG AATTGGAGCT TGATAACTTC TTTCACATAA CTTGGGAGAA TAAGGAAGCC AAGATTAATG AAATTTTTAC TAAAATCGTC AATGAATTTC ACTCAGAAAA TTTGTATGCA AAGACCCTGG CAGACGCCTT GGCCTCTTAT TTCCTCATTA ACTTCCTAAG ACATTTTAGG AATGAAATAG AAGTTGTCCC TGACATAAAT ATAAATAGGA GAATCGACTA CATAAAAAGC TACATCGACA ACAATTACTC CCTCGACCTA AGTCTAGAAG GACTTTCTAA TATGGCCTAT ATGAACAAGT TTCACTTAAT AGCTGAGTTC AAGCAGTCCT ATAGGGTAAC TCCTATTGAG TATCTAATAC TTAAAAGAAT CGAGGTCTCC AAGGGACTTT TGATATCTAC AAACCACTCT ATGGAAACAA TCGCTGAAAT CGTAGGCTTT AATTCTCAAT CTTATTTCAA CCAAGTTTTT AGAAAAAAGG TAGGCATAAC CCCTTCTCAA TTTAGGAAAA AACACAGACT ATAA
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Protein sequence | MENINENILE SSIFKDDIEI KILNANESFL TNENSSRIQF HPFIYFYFIV EGSGTFFIEN DSIKIKKNDL VIINSNIGHN LYVDEDEYAV KTLGFGLESI GLTSHLDEVQ SEEELELDNF FHITWENKEA KINEIFTKIV NEFHSENLYA KTLADALASY FLINFLRHFR NEIEVVPDIN INRRIDYIKS YIDNNYSLDL SLEGLSNMAY MNKFHLIAEF KQSYRVTPIE YLILKRIEVS KGLLISTNHS METIAEIVGF NSQSYFNQVF RKKVGITPSQ FRKKHRL
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