Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1113 |
Symbol | |
ID | 8397900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1195951 |
End bp | 1197102 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644995460 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003152861 |
Protein GI | 257066605 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000378306 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAAAG AAAAAATATA TTGGCCGAAT TTCATCTTAC TTTTAAGTGT GACCTTTATG GCAATCATCT CAGAGCTTAT TCCTTCGGGG ATTTTGCCAG AACTTACAGA GGGTCTAAGG ATTAGCGAAA CTCAGGCCGG AAATCTCTTG GGCTTTTATG CTATAGCGAG TGCAATTTTT TCGATTCCTC TTATATCTGC TACGGTTGGA TTTTCTAGGA AGAAATTGCT CCTGGCTCTT CTTATGGGCT TTGCCCTAGG CAATTTCCTT GTGGGAATTT CCACTACATA TGGCATCGCT CTTCTTGGGA GGATGATAGG AGGAATTTGT GCAGGGATTC TTTGGCCCAT GGTTGCATCT TTTGGGATGA AGTTAACTGA TAAGGCCCAC AAGGGTTTTG CCGTCGCCTT TATCATGAGT GGGACGACCT TTGGTATGAG CCTGGGCCTT CCGATTTTTA CTGCAATAGG TAGAAATATT TCTTGGAGAG CAGAGTTTTT TGCTGTTTCA CTCGTTATTT TCCTTATAGG AATCCTTATA TATTTTATCC TACCAGAAGT TAGCGGTGAG ATTCGTGATA GGACGAACTC CCCTTTTACC TTGATTAGAA ACAAGGGCGT GCTCATAGTA ATGCTTCTTA CTTCCCTTGC AGCCATTGCA AACTACGGGG TTTACACTTA TACCACAAAC CTAATAAGGG CTATCGATTA CACAAGAGGA ATTGGCTTTG CTCAAGTTTT GTTTGGTCTT GGCTCTATTA TTTCTGTCAT TATTGCAGCA AAGGTAATTG ACAGGCACAT CAGATCTCTT ACTATTTTTA TGTTCGGATC AGCTCTTTTG TCCCTAATCA TATTTGCTTT TTTCGCAAGT TATAGCCTCT TTTGTGATAT GGCCTTTTTA CTTCGGGGAA TAGGATTTGG GGCCTTGGTT AGCCTATTTC AAACAGCGGT AGCTAGGCAG GTTAGGGAAA ATGCATCGGC TGTAGCCACA TCCCTCCAGT CAGCAAGCTT TAACTTCTCT ATAATGCTTG CAAGTTCCCT TGCGGGGAGC CTTCTTACAA ATTATTCTGT TAAATTTATG CTTAGCTTTA TGTGTCTGGT CCTTGTAGTT GGCATATTTG TAGCGTTTTT ATCAAAGAAA ACTTTATATT AA
|
Protein sequence | MEKEKIYWPN FILLLSVTFM AIISELIPSG ILPELTEGLR ISETQAGNLL GFYAIASAIF SIPLISATVG FSRKKLLLAL LMGFALGNFL VGISTTYGIA LLGRMIGGIC AGILWPMVAS FGMKLTDKAH KGFAVAFIMS GTTFGMSLGL PIFTAIGRNI SWRAEFFAVS LVIFLIGILI YFILPEVSGE IRDRTNSPFT LIRNKGVLIV MLLTSLAAIA NYGVYTYTTN LIRAIDYTRG IGFAQVLFGL GSIISVIIAA KVIDRHIRSL TIFMFGSALL SLIIFAFFAS YSLFCDMAFL LRGIGFGALV SLFQTAVARQ VRENASAVAT SLQSASFNFS IMLASSLAGS LLTNYSVKFM LSFMCLVLVV GIFVAFLSKK TLY
|
| |