| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1105 |
|---|
| Symbol | |
|---|
| ID | 8397892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1182152 |
|---|
| End bp | 1182628 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644995452 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | YP_003152853 |
|---|
| Protein GI | 257066597 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG TAAGAATAAT AATGGGTTCA GCCTCAGATG TAGAAATCGC CAAAAAAGTA
ACATCAATCT TAAAAGACTT CGATATTGAT TACCAAGTAT CTGTAATTTC TGCTCATCGT
GCACTAGATC TTCTGGAAGA GACAATAAAA AAAGATGACT GTAGTGTCTA TATAGGAATT
GCCGGCATGG CAGCTCACCT TGCAGGAGTT ATGGCAGGAA TGACAATAAA ACCTGTTATA
GGAGTTCCAG TTGGTGGAAG TAACACAGCA GGTCTTGACG CCTTACTATC AATGGTACAA
ATGCCAAAGG GAGTTCCAGT AGCTACAGTT GCCATAAATG GTGGCAATAA CGCAGCCCTC
CTTGCTATAC AAATTCTCGC TCTAAAGGAT GAAGAGCTAG CCTCTAGACT AAAGGCTTAC
AAGAAAGAAA TGCTTGAAAA AGTTCTAGCA GATGATAAAA ATCTCGGTGA AATATAA
|
|---|
| Protein sequence | MTDVRIIMGS ASDVEIAKKV TSILKDFDID YQVSVISAHR ALDLLEETIK KDDCSVYIGI
AGMAAHLAGV MAGMTIKPVI GVPVGGSNTA GLDALLSMVQ MPKGVPVATV AINGGNNAAL
LAIQILALKD EELASRLKAY KKEMLEKVLA DDKNLGEI
|
|---|
| |