Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1102 |
Symbol | |
ID | 8397889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1178365 |
End bp | 1180293 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644995449 |
Product | aconitate hydratase |
Protein accession | YP_003152850 |
Protein GI | 257066594 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01342] aconitate hydratase, putative, Aquifex type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCTTAT CATTAGCTAT GAAAATACTC AAAAGTCACT TACTCAAGGG AGAATTAATT CCTGGCCAAG AGATTGCAAT TAGGATCGAT CAGACCCTAA CCCAGGATTC TACAGGAACT ATGGCCTATC TTCAGCTAGA AGCTATGGAT ATAGAAAACG TACAGACACG AAACTCCCTT GCTTACATAG ATCACAACAT CCTCCAACAA GGCTTTGAGA ATGCAGATGA TCACGAATTT ATCAAATCTG CTGCTAATAA ATATGGTATT ACTTTCTCCA AGCCAGGAGG AGGAATTTGC CATCAGGTAA ATCTAGAACA GTTTGCCAAA CCAGGCGATA CCCTCCTAGG ATCTGATTCA CACACTCCTA CTGGAGGAGG ACTTGGTGAG CTTGCCATTG GGGCAGGAGG ACTTGAAGTT GCAGTAGCTA TGGCCAGGGG CTTTTACTTT GTCAAAGTGC CTAAGATATA TAGGGTAAAT CTAAAAGGAA GCCTTCCGTC ATATGCAAAT GCCAAGGATG TAATCTTATA CATATTAGGA AGGCTAAGTG TTAAGGGAGG AACTGGTTAT ATTATGGAAT ATAGCGGGGA AGGTGTAAAG TCCTTATCTC TTACAGATAG GGCTACTATT TGTAATATGG GGGCAGAGCT TGGGGCTACT ACTTCGATTT TCCCGACAGA TGAGAATACT AGAATGTATC TTAAGTCACA AAATAGGGAG GATGATTATA TTAAGCTAGA AGCAGACCCT GACGCCTCCT ATGATGAGAC CATCGACATA GATTTAAGTG AGATTGAACC AGCTGTCGCA AGACCCCACT ATCCAGACCA ATATATGAAA GTTTCTGATT TAGGAAAGAT AAAGGTTGAT CAAGTAGCTA TAGGATCTTG CACTAATTCA TCCTACGAAG ATCTGATGAA AGTTGCTTCA ATCTTAAAGG ATAGGACAGT TCATCCAGAT GTTTCCTTAG TTATTTCTCC AGGATCAGCC ACTATTCTAG AGAAAATCTC AGAAAATGGG GCCCTTGCTA CCTTTATCAA GGCAGGAGCC AGAGTATTAG AGTCAGGATG TGGACCATGT ATAGGGATGG GACAAGCTCC AAAGGCGGGA GCCATTTCCA TAAGGAGTTT TAATAGAAAC TTTAAGGGAA GGTCTGGGAC TATGGATGCT CAAATTTATC TAGCAAGTCC AGAAACTTGT GCTGTAAGTG CTGTTATGGG CTATATAGCA GATCCAAGAG AAATATCATA TGAGACAGAC TTTGATAAAA ATGTAAGCTT CAACCAAAGC CAAGCTTATT TTATAAAGCC AATCGAAGAT AGGTCGAAGA GGGTAAAAGA AACAATTAAG GGGAAAAATA TCAAAGACTT TCCAAAGGCA GAAAAGCTAA AGGATATAGA AAAGAAAGTA ATCTACAAGG CAGGTGATGG GATAACCACA GATGATATCT GCCCATCAAA TGCCAAACTC TTACCATTTA GGTCAAACAT AGCCTATCTA TCAGACTTTG CCTTCACTAC CAAAATCAGC GACTTTAAGG AAAGGTGCGA GAAATATGGG GGAGGAATTA TTCTAGCAGG AGAAAACTAC GGTCAAGGCT CTTCTAGGGA GCATGCTGCC CTCATTCCTT TATATCTAGG AATCAAGGCG GTAGTTGCCA AGTCCTTTGC AAGGATACAT AGGTCAAATC TAATAAACAA TGCTATAATT CCTCTAGAAT TTGTAGATCA TAATGACTAT GGCAAGATAG ATGAATATGA CGATATTAGA ATTTCAAATA TAAGAGAAGA TATAGATAAA GGCGAGTTTA TCCTAGAGGA TTTAACAAAG GATATAAGGA TTAGATTAAA AGCCGACCTA TCGGAAAGGG AGAAGGAAAT CCTCCTAGAA GGTGGCTACC TAAATTATGC GAAAGGATTG GAATTATAG
|
Protein sequence | MGLSLAMKIL KSHLLKGELI PGQEIAIRID QTLTQDSTGT MAYLQLEAMD IENVQTRNSL AYIDHNILQQ GFENADDHEF IKSAANKYGI TFSKPGGGIC HQVNLEQFAK PGDTLLGSDS HTPTGGGLGE LAIGAGGLEV AVAMARGFYF VKVPKIYRVN LKGSLPSYAN AKDVILYILG RLSVKGGTGY IMEYSGEGVK SLSLTDRATI CNMGAELGAT TSIFPTDENT RMYLKSQNRE DDYIKLEADP DASYDETIDI DLSEIEPAVA RPHYPDQYMK VSDLGKIKVD QVAIGSCTNS SYEDLMKVAS ILKDRTVHPD VSLVISPGSA TILEKISENG ALATFIKAGA RVLESGCGPC IGMGQAPKAG AISIRSFNRN FKGRSGTMDA QIYLASPETC AVSAVMGYIA DPREISYETD FDKNVSFNQS QAYFIKPIED RSKRVKETIK GKNIKDFPKA EKLKDIEKKV IYKAGDGITT DDICPSNAKL LPFRSNIAYL SDFAFTTKIS DFKERCEKYG GGIILAGENY GQGSSREHAA LIPLYLGIKA VVAKSFARIH RSNLINNAII PLEFVDHNDY GKIDEYDDIR ISNIREDIDK GEFILEDLTK DIRIRLKADL SEREKEILLE GGYLNYAKGL EL
|
| |