Gene Apre_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1096 
Symbol 
ID8397883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1173094 
End bp1173672 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content34% 
IMG OID644995443 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003152844 
Protein GI257066588 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACTA GAGAAAAAAT TTTAGATAAA TCTTTAGATT TATTTTCCGA AGATGGATAT 
TCTGATGTAA GTTTAGAGAA AATTGCTTGT GCAGTTGGTA TCAAGGCACC ATCGATATAC
AAGCACTTTA AGTCAAAGAA GGATATTTAT GATAGCCTCT TGGCTACAGC TATATGTAAG
GTGGACCAAC GTCTAGAAGG GATCGATAAA TATGTAGTTA ATAAGGGCCA GTCAAATAGG
CTTGATATTC CTAGACTTTC TATCGATATA TTTGAGTATC TACTTCATGA TAATTATGTT
TCACGAATTA GGAAAATGAT TTCAATAGAG ATGTATAAAA ATCCCCATGC CATGCAGTTT
TATGTGGAGA AGTTTATTGA AAACCCAATT GCCAAACATG AGGAGTTTAT TAGAAATCTG
GGAATCAAGG AAGATTATGA CGTAAAGGTC CTAGCGACAA TATTTTACTC ACCGATACTT
CTAGCAGTTA AGCTATATGA TGCTGACCCA ACTAAGGAAG ATGAACTAGT AGATTTATTG
AATAAATCTT ATAAGAGGTT AGAAAATATA CGGAGATAA
 
Protein sequence
MNTREKILDK SLDLFSEDGY SDVSLEKIAC AVGIKAPSIY KHFKSKKDIY DSLLATAICK 
VDQRLEGIDK YVVNKGQSNR LDIPRLSIDI FEYLLHDNYV SRIRKMISIE MYKNPHAMQF
YVEKFIENPI AKHEEFIRNL GIKEDYDVKV LATIFYSPIL LAVKLYDADP TKEDELVDLL
NKSYKRLENI RR