Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1091 |
Symbol | |
ID | 8397878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1168405 |
End bp | 1169160 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644995438 |
Product | ABC transporter related |
Protein accession | YP_003152839 |
Protein GI | 257066583 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATAT TAGAATTAAA AAATATTAAA CGCATTTATG AAAGTAAGAA CATAAAGACT GAGGCCCTAA GAGATGTGAA CTTATCGGTA GAAGAAGGCG AGTTCATTTC TATAATGGGA GAGTCGGGAG CAGGTAAGAC TACTCTTTTA AATATTATAG CTACCCTCGA TAGGCCATCT TTTGGAAATA TTAGTCTAAA GGGCAAAGAT ATGACAAAGC TTAAGGATAG TGAGCTTGCA TCTTTTAGAA GAAAAGAGCT GGGCTTTGTC TTCCAAGACT TCAATCTCTT AGACCAATTT ACAAATAGGG ATAATATCTA CTTGCCTCTT GTCCTATCAG ATGAGAAGGA AGAGCTTATG AATAAAAGAC TAGATGAGAT TAAGGAAAAA CTTGCTATAG AAGAAATTCT AGATAAATAC CCTTACCAAA TTTCAGGTGG GCAAAAGCAA AGGGTAGCCA TAGCTAGGGC CTTAATTACA AGGCCTGCCC TACTTTTAGC TGATGAGCCA ACGGGATCCC TTGATTCAAA CTCTTCAAAT ATGATCCTGG ATTTATTTAC TAGGGTAAAT GAAATGGGTC AAACTGTCCT TATGGTAACC CACTCCTTAA ATGCAGCTTC TTTCGCGAAA AGAGTTCTTT TCATCAAGGA TGGAGTCGTA TTTCATGAAA TCTACAAGGG AGAAGGAGAA GAGCGTAGCG ACTTTATGGA AAGGATCAAC AAGTCACAAA TCATGCTATC AAGGGGTGAT TTATAA
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Protein sequence | MPILELKNIK RIYESKNIKT EALRDVNLSV EEGEFISIMG ESGAGKTTLL NIIATLDRPS FGNISLKGKD MTKLKDSELA SFRRKELGFV FQDFNLLDQF TNRDNIYLPL VLSDEKEELM NKRLDEIKEK LAIEEILDKY PYQISGGQKQ RVAIARALIT RPALLLADEP TGSLDSNSSN MILDLFTRVN EMGQTVLMVT HSLNAASFAK RVLFIKDGVV FHEIYKGEGE ERSDFMERIN KSQIMLSRGD L
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