| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1083 |
|---|
| Symbol | |
|---|
| ID | 8397870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1159799 |
|---|
| End bp | 1161409 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644995430 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003152831 |
|---|
| Protein GI | 257066575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA ATGAATTAAA TATAGGAAAT GAAATTTTAA GGGCAATTGA TGATTTAGGC
TACGAAAAGC CAAGTCCCAT CCAAGAAGAG TCTATCCCCC ACCTTTTGGA AGGGAATGAT
CTAATAGGAA AATCTCAAAC AGGAAGCGGG AAAACTGCGG CCTTCGCCAT ACCAATTATA
GAAAATATCG AAGCAAATGG AATAACTCAA GCCCTCATCC TCTGTCCAAC AAGAGAGCTT
TGTATACAAG TATCAAAAGA AATCGAAAAG CTTTATAAAT ACAAGAAAGA AATCAAAATC
CTTTCTGTCT ATGGTGGAAG TCATATAGTA AGGCAAATCA AGAGCCTAAA AAAAGGAGTA
GAAATTGTAG TTGGTACTCC TGGAAGACTG ATGGATCTTA TGAGAAGAAA GGTCTTAAAG
CTCGACCAAC TTAAAACAGT TGTCTTGGAT GAGGCTGACG AAATGTTTGA TATGGGCTTT
AGGGATGATA TGAAATTCAT CCTTGATAGG ACAAATCCCA ATAGACAGAC TTGTTTCTTT
TCAGCAACTA TGGGACCTGA AATCCAAGAA TTTTCTAAGC TTTATCAAAC TAATCCCTAC
GAAGTCAAAA TAAAATCTAA AGAAGTAACT GTTGATAGGA TCGACCAATA TTATATTAAA
CTTAAAGAAT CTATGAAGGA AGAAGCCTTG ATGCGACTTC TAGAAATCCA TAAGGCAAAT
CTTGCTATCG TATTTTGTAA TACCAAGAGA AAAGTCGACA GGCTTGTAGA AAGTCTCACC
AAGAAAAACT ACCTAGTAGA CGGCCTTCAT GGAGATCTCA AACAAAGTAG TCGTGACCAA
GTCATGAAGA AGTTTAGAAA TAAAACCATC CAAATCCTTG TAGCGACAGA TATAGCTGCT
CGTGGTCTTG ATGTGGATGA TGTAGATATT GTCTTTAACT ATGACCTACC TCAGCTTGAC
GAATACTATG TCCACAGGAT TGGAAGAACA GCCAGAGCTG GCAAAAGCGG TCTAAGCTTT
TCCCTAATCT CAGGTCGTGA TAATAATAGG CTAAGGCAAA TCGAAAATTA TACCAAGGCC
AATATAAAAC AGATGCCCGT CCCAACCCTT GTCCAAATGG ATAGGCAAAG CGACCTTCGT
CTTATAGAAG ATATTTCATC TAAGCTTGAT AAAAATGAAG ACCTCAGTAG AGAAAAAGAT
ATACTAATAA GACTTATGGA AAAAGGCTAT GATCCATTTA TGATCTGCCA GGTCTTACTT
AAAGATAAGC TAGATATTAA TAATAACCAC GAAAAGCTTG AAGGAATTGA CCTTAAATCG
GAGAAGAAAT CTAAGAGTAA GTCAAATAAT AAAACTAAAA AGAAATACGA CAAGGAAATG
ACAACTCTCT TCATGAACAG GGGTAAGATT GATAATTTCA CCAAGGATAA GATAATAAAG
GCCCTAGCAA GAATGGCCAA AGTCCCAAAG GATAAAATAG GCCAAATCAG GATTCAAAAA
ACCTATAGTT TTATAGATAT AGAAAAGCCT GAAGCCTTTA AGGCAATTAG GGCAATTGAT
AATAAGAAAA TATCTAGCAA AAAAGTTAAA ATAGAAGAAT CAAATAAATA G
|
|---|
| Protein sequence | MKFNELNIGN EILRAIDDLG YEKPSPIQEE SIPHLLEGND LIGKSQTGSG KTAAFAIPII
ENIEANGITQ ALILCPTREL CIQVSKEIEK LYKYKKEIKI LSVYGGSHIV RQIKSLKKGV
EIVVGTPGRL MDLMRRKVLK LDQLKTVVLD EADEMFDMGF RDDMKFILDR TNPNRQTCFF
SATMGPEIQE FSKLYQTNPY EVKIKSKEVT VDRIDQYYIK LKESMKEEAL MRLLEIHKAN
LAIVFCNTKR KVDRLVESLT KKNYLVDGLH GDLKQSSRDQ VMKKFRNKTI QILVATDIAA
RGLDVDDVDI VFNYDLPQLD EYYVHRIGRT ARAGKSGLSF SLISGRDNNR LRQIENYTKA
NIKQMPVPTL VQMDRQSDLR LIEDISSKLD KNEDLSREKD ILIRLMEKGY DPFMICQVLL
KDKLDINNNH EKLEGIDLKS EKKSKSKSNN KTKKKYDKEM TTLFMNRGKI DNFTKDKIIK
ALARMAKVPK DKIGQIRIQK TYSFIDIEKP EAFKAIRAID NKKISSKKVK IEESNK
|
|---|
| |