Gene Apre_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1080 
Symbol 
ID8397867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1157749 
End bp1158726 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content40% 
IMG OID644995427 
Productdihydroxyacetone kinase, DhaK subunit 
Protein accessionYP_003152828 
Protein GI257066572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02363] dihydroxyacetone kinase, DhaK subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TCATCAACGA CGTAGATTTG ATAATTGATC AAATGATCGA TGGCTTGGTA 
AAAGCTAATG ACAAGATTCT AGAAAGACTT GACGATAGTA CAGTTGTCGC AAGAAAGGGA
CCTTCTAAAA AAGGCAAGGT CGGAATAATC TCTGGTGGAG GAAGCGGCCA CGAGCCAGCC
CACGCAGGCT ATGTCGGAGA AGGTATGCTC GATTGTGCTA TATGTGGTAG TATCTTCACC
TCCCCTACCC CAGATCAAAT CTTAAAGGCA ATAGAGAAAG CTGACAGCGG TAGTGGCGTA
TTTATGGTCA TCAAAAACTA CCAAGGCGAT GTAATGAACT TTGAGATTGC CCAAGAAATG
GCAGAAATGC AAGATATCAA AGTCGATTCT ATAATTGTAA GAGATGATAT AGCTATAGAA
AACTATGAGG ACAGACGTGG AGTTGCTGGA ACTATTTTCG TCCATAAGGT TCTTGGAGCT
ATGGCTGAAG AAGGAAAGAG CCTTGATGAA ATAAAAGCAA AGGCAGAAGA GATTGTTCAA
AATATCAAAA CCATAGGCCT TGCTACAAAA CCTTGTACCA ATCCAAATGA CGGCAAGGAA
AGCTTTAGCC TAGAAGAAGA CGAAATCGAA ATGGGTATTG GAATCCACGG AGAAGAAGGA
ATCAAGAAAG AAAAAATCCA AAGTGCTGAC GCTATGGCCA AGGAAATGGT CGATAGACTC
CTCAAAGAAA TACCTGAGGA CAAGAAAGAT TACGCCCTAA TGGTAAATGG CATGGGTCAA
ACTACAGAAA TGGAACTATA TCTAGTAAAT AATTTCGTTA CTGATTATCT AAAGGAAAAT
TCTATAGAAA TCAATAGAAC TTACGTTGGC AACTACATGA CAAGTATGGA CATGGCAGGA
TTTTCACTCA CACTCTTTGC TGTAGATGAT CAAATTGTTA AATATCTCGA TAGAGAAGTT
AAGGTAGGAA GAAGATAA
 
Protein sequence
MKKIINDVDL IIDQMIDGLV KANDKILERL DDSTVVARKG PSKKGKVGII SGGGSGHEPA 
HAGYVGEGML DCAICGSIFT SPTPDQILKA IEKADSGSGV FMVIKNYQGD VMNFEIAQEM
AEMQDIKVDS IIVRDDIAIE NYEDRRGVAG TIFVHKVLGA MAEEGKSLDE IKAKAEEIVQ
NIKTIGLATK PCTNPNDGKE SFSLEEDEIE MGIGIHGEEG IKKEKIQSAD AMAKEMVDRL
LKEIPEDKKD YALMVNGMGQ TTEMELYLVN NFVTDYLKEN SIEINRTYVG NYMTSMDMAG
FSLTLFAVDD QIVKYLDREV KVGRR