| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1052 |
|---|
| Symbol | |
|---|
| ID | 8397839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1126671 |
|---|
| End bp | 1127174 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644995400 |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_003152801 |
|---|
| Protein GI | 257066545 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.426271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGTAGTACT ACTAGAATCA CTATTCGAAA AAAGTGAATT AATATATCCA
TATCACAGAC TAAGGGAGGA CTTTGATGTT GTCCTTGTAG GAAGCGAGAA GTACGTAGAA
TATCCATCAA AAGCTGGTTA TAAGGTAAAA TCTGACATAA TAAGCAAAGA AGCCTATCCA
AGTGAATTTG ACGGAGTGTA TATTCCGGGA GCTTACTCAC CAGATGGAAT GAGAAAGCAC
GAAGCTACAA TAAATTTTGT CAAAAAATTT CACGAAAACG GCAAGTCAAT TGCCGCTGTA
TGCCACGGTC CATGGGTTGT CTCTGATGCA GGACTTCTTG ATGGAGTAAA GGCTAGCTCA
ACCCCTACTA TCAAAAAGGA CTTGATAAAT GCTGGTGCGA AATGGGAAGA TAGGGAAGTA
GTTGTATATA ATAATATAAT TACAAGAAGA TCTCCTAAAG ACCTACCAGC CCACGTAAAG
GCCTTTGTTG ATGCTTTAAA ATAA
|
|---|
| Protein sequence | MKKIVVLLES LFEKSELIYP YHRLREDFDV VLVGSEKYVE YPSKAGYKVK SDIISKEAYP
SEFDGVYIPG AYSPDGMRKH EATINFVKKF HENGKSIAAV CHGPWVVSDA GLLDGVKASS
TPTIKKDLIN AGAKWEDREV VVYNNIITRR SPKDLPAHVK AFVDALK
|
|---|
| |