| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1023 |
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| Symbol | |
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| ID | 8397810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1096455 |
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| End bp | 1097156 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644995371 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003152772 |
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| Protein GI | 257066516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGATTA ATAAATATAT AGCCAGTAGT GGATACACTT CAAGGAGAAA AGCCGATGAT
CTTGTAAAAA AAGGGAAAGT TAAGGTTAAT GGCGAAACAA CCCATGAGCT AGGCCTTGAT
ATAAAAGACT CTGATGTAGT TGAAATTGAC GGAAAGGTTC TGGAAATCGA AGAAAAAATC
TATATCAAAC TCTATAAACC AAGAGGCTAT ATTACGAGTA ACTTCGACCC CTACAATGAC
CGTGACCTAA ATGATTTAGT AAAATTAGAT CAGAGATTTT TCGCTGCGGG AAGACTTGAT
AAAGATAGTG AGGGTCTATT AATTATTACA AATGATGGGA TCTTTACTAA TCAAATAATT
CATCCTAGTA AGAAGCTTGA TAAGACTTAC ATAGTAAGGG TGAGCCGATT ATTAAATAAG
GAAGAATGTC AACAATTCGA GTCAGGGATT GACATAGGAG ATTCTGAAAT GACTTCTGAT
TCTAGGATAG AACTCATTGA TAAGACAAGT AAAACTTACA AAGTTACGAT TCATCAAGGA
TATAACAGGC AGATTAGAAG GATGTTCGCC TACTTTTCAA GCGAGGTTAA GATGCTTAAA
AGAATCAGCA TAGGGCCTAT TAAGCTTGAT GGTATGAAGC CTTACGAGAA AAGAAACTTT
GATCAGGCTG AGATGGATTT TGTAAGAAAA ACTAGGGGAT AG
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| Protein sequence | MRINKYIASS GYTSRRKADD LVKKGKVKVN GETTHELGLD IKDSDVVEID GKVLEIEEKI
YIKLYKPRGY ITSNFDPYND RDLNDLVKLD QRFFAAGRLD KDSEGLLIIT NDGIFTNQII
HPSKKLDKTY IVRVSRLLNK EECQQFESGI DIGDSEMTSD SRIELIDKTS KTYKVTIHQG
YNRQIRRMFA YFSSEVKMLK RISIGPIKLD GMKPYEKRNF DQAEMDFVRK TRG
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