| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1019 |
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| Symbol | |
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| ID | 8397806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1091919 |
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| End bp | 1093979 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644995367 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_003152768 |
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| Protein GI | 257066512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
[TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.901496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA TTATTGCAAA TTATTCAGGA TTTTGCGGTG GTGTAAGAAG GTCTGTGGAG
CTTGCCGAAG AAGCTATAAA GAATGAAGGC GAGCGCTACT GTGTAGGACC TTTGATACAT
AATCCGCAAT TAGTCGAGAA ATTAGAAAAT GAAGGACTAG AAGTTGTTGA TAAAAAAGAA
GCTCTAAAGA TAAAAGATTC TACAGTTCTT ATAAGGGCGC ACGGAGAAAG TGCCGACTTT
AAAGAAAGAC TTTTAGCAAA CGGTAACGAA GTAGTGGATG CTACTTGTCC AGTACTAAAC
AATATATACA AAAAGATTAT AGAAAAAGAA AATGATGGAT ACCAGGTGGT TATTGTTGGA
GATAAAACGC ATCCCGAAAT AATTGCTATG GAATCTTTCC TAAACAATGG TATAATAGTT
TCAGATGAGA CTGAAGCAAA AAATATAAAA TGTAATAACA AGCTTTATGT TGTTAGTCAA
ACTACAAATA GGCTTGATTA TTTTTATGAT ATTGCTAACA AGTTAAAAGA AAATAATGAT
AGTGTAGTAA TAGAAAACAC AATATGTAAA GCAACTGAAA ATAGGCAAGA AGCAGCCAAA
TCCTTAGCTA AGGAAGTTGA TTGCATGATT GTAGCTGGTG GTTTTAATAG TTCTAATACA
AATAAGCTAT ATCAAGTAGC TAATCTGTAT TGTAAAAATG TTTTTAGGAT TGAAACTGTT
AAAGATCTAC CTTTGCAAAA GCTCTCTAAA TTTAAAAAAG TTGGTATAAT CGCAGGTGCC
TCTACACCTG ATGAGATTAT CGAGGAGGTA GTAAGTAGTA TGGATGAATT CACAAAAGAA
GAATTTATGA ACAGTCTAGA GGATAGTTTA AAGAAGATTT ACCCAAAGGA AATCGTAAAG
GGTACAGTTA TTGATGTTAA GGATGATGAA GTATTCGTTG ACATTCAATT TAGAGCTGAC
GGAATTATCA AACTAGACGA AATGACAGAA GAAGAAGCAA AAGATCCAAA AAACAGTTTT
AACGTAGGTG ATGAGATTGA CGTATTCGTT ATCAAATTAG ATGACGGTGA AGGCAATGTT
TCACTTTCTA CAAGAAGAGT TGAAGGTATG AAGGTATGGA AAGACCTAGC AGAAAAGGCT
GAAAATGATG AGTTAGTTCA CGGAGTAGTA AGTGGATTCA ACAAGGGTGG TCTTACTGTT
AATGTTGAAG GAATAAATGG ATTTGTTCCA GCAAGCCAAA TCGCAACATA CTTTGTTAAA
AACTTCAAGA AATTCGTTGG AGAAGAGTGG GATCTAAAAA TCATCAGCAT CGATGAAAGA
AAAAATAGAC TAGTTCTTTC TAGAAAAGAA GTAGTTGAAG ATGAACTTGA CGGACTATGG
GAAGAACTTG AAGAAGGACA AGTAGTAACT GGAAAAGTTG CAAGGCTTAC AGACTTCGGT
GCTTTCGTTG AAGTAAATGG TCTTGATGGA CTCCTACACG TATCAGACAT CGCTTGGAGC
AGAGTTGAAC ACCCATCTGA TGTACTAAAC GTTGGTGATG AAATCGAAGT TAAAATTCTA
AAATTAAATC AAGAAAAGAA CAGAATTTCT CTTGGACGTA AACAACTTCT AGAAAAACCA
TTTGAAGCAT TCGTTAACCA ACACGAAGTT GGTGATGTTG TAACTGGTAA GGTTGTTAAC
CTACTTGACT TTGGTGCTTT CGTTGAAGTA GCAGACGGAG TTGAAGGACT AGTTCACGTT
TCAGAAATTT CATGGGAACA TGTTGAAAAG CCATCTGATG AGCTTAACGT TGGTGATGAA
ATCGAAGTTA AGATCATAAG CATCGATACA GATGAAGAAA AAGTTGGCCT AAGCATTAAA
GCTCTTAAGG AAGCTCCAGA AAGACCAGAA AGAAGAGCTA AGAGAGCTCC AAGAAACAAT
GATAGACCAA GAAGAAGACC AGAAAGAGAT AATTCTGCTT CATTTGGTGA TGACGATCTA
AATAACAATT TAGGTAACCT ACTAGAACAA GCATTATCTG AACAAGGTAG TGAAGGATTA
CTAGAAGGCG AAGACGAATA A
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| Protein sequence | MEIIIANYSG FCGGVRRSVE LAEEAIKNEG ERYCVGPLIH NPQLVEKLEN EGLEVVDKKE
ALKIKDSTVL IRAHGESADF KERLLANGNE VVDATCPVLN NIYKKIIEKE NDGYQVVIVG
DKTHPEIIAM ESFLNNGIIV SDETEAKNIK CNNKLYVVSQ TTNRLDYFYD IANKLKENND
SVVIENTICK ATENRQEAAK SLAKEVDCMI VAGGFNSSNT NKLYQVANLY CKNVFRIETV
KDLPLQKLSK FKKVGIIAGA STPDEIIEEV VSSMDEFTKE EFMNSLEDSL KKIYPKEIVK
GTVIDVKDDE VFVDIQFRAD GIIKLDEMTE EEAKDPKNSF NVGDEIDVFV IKLDDGEGNV
SLSTRRVEGM KVWKDLAEKA ENDELVHGVV SGFNKGGLTV NVEGINGFVP ASQIATYFVK
NFKKFVGEEW DLKIISIDER KNRLVLSRKE VVEDELDGLW EELEEGQVVT GKVARLTDFG
AFVEVNGLDG LLHVSDIAWS RVEHPSDVLN VGDEIEVKIL KLNQEKNRIS LGRKQLLEKP
FEAFVNQHEV GDVVTGKVVN LLDFGAFVEV ADGVEGLVHV SEISWEHVEK PSDELNVGDE
IEVKIISIDT DEEKVGLSIK ALKEAPERPE RRAKRAPRNN DRPRRRPERD NSASFGDDDL
NNNLGNLLEQ ALSEQGSEGL LEGEDE
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