| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0983 |
|---|
| Symbol | |
|---|
| ID | 8397769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1054434 |
|---|
| End bp | 1054754 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 644995330 |
|---|
| Product | TrpR like protein, YerC/YecD |
|---|
| Protein accession | YP_003152732 |
|---|
| Protein GI | 257066476 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial
[TIGR02531] TrpR-related protein YerC/YecD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00199901 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA ATAAATTAAG AAACAAAGAA ATAGATGAGT TTTTTGAAGC AGTATTAATG
CTTGAAGATA TTGAGCAATG TTATGATTTC TTCACAGATA TTTGTACAGC TAGAGAAATC
CAATCAATAG CACAAAGACT ACATGTTGCA AAACTTCTTA AGATTAGAAA AACATACAGT
GTAATCGAAG AAGAAACAGG AGCATCAACT GCTACAATTT CTAGAGTAAA CAGATCATTA
AATTATGGAT CTAACGGCTA TGATATTGTA TTGGAAAGGC TTATCGAAAA GAATTTAAAA
GAAGAAAAAA GCAAAGAGTA A
|
|---|
| Protein sequence | MKENKLRNKE IDEFFEAVLM LEDIEQCYDF FTDICTAREI QSIAQRLHVA KLLKIRKTYS
VIEEETGAST ATISRVNRSL NYGSNGYDIV LERLIEKNLK EEKSKE
|
|---|
| |