Gene Apre_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0977 
Symbol 
ID8397763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1045728 
End bp1046990 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content32% 
IMG OID644995324 
Productamidohydrolase 
Protein accessionYP_003152726 
Protein GI257066470 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.588063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAT TAATTAAAAA TACACAACTT CTTACAATGG AAGATGAAGA AATAAAAACC 
GCGAATATTT ATATAGAAGA TGATAAGATT TCCTATATAG GAAGTAGGGA AGATTTTAAA
AGTGATAGGG TTATAGATGG AAAAAACTTT CTAACAATGC CTGGATTTGT GAATGCTCAT
ACTCATGTTG CTATGACACT TTTTAGAAAC TATGGTCCCG AGACAGATTT GATGACTTGG
CTTAACGATT ACATATGGCC ACTTGAAGAT AAGCTTAAGG CAGAGGATGT CTACTATGGA
TCAAAACTTG CTCTCTTAGA GATGATTAAG GCAGGGACAA CTAGCTTTGC AGACATGTAT
TTTTTCTGCG AGGAAACGGC AAAAGCTTGC AAGGAAATGA ATATTAGATC GCAAATTTCT
AGAGGGTTGG CGATTCCAGA TCATGGTTTT TCAAAAATCA AGGAAAATAT AGATCTTGCT
AATAAATATA GAGAAGATAA GCTTATAGAT ATAGGACTAG GTCCTCATGC AGTTTATACT
TCTGATCTAG ATTATTTAAA AAAAATATCT GACTATGCTC AAGAATACAA GTTACCTATT
CATATCCACT TATCAGAGAC AAAAAAAGAA AATGAAGATT GCTATAAAAA TTATAAGATG
AGCCCTACTG AGCTTTTTGA TAAGGCAGGT ATCTTTAAAA ATAGAACAAT AGCTGCTCAT
GGAGTATATT TATCCGATAA TGATTTGGAC ATTATAAAGG AAAATAATGT AAGCGTTGTA
CACAATCCAA GCTCTAATTT GAAACTGTCA TCAGGCTTTT TAGACCTAGC CAGATTAATC
GACAAGGGAA TTAATGTATG CTTAGGTACT GATTCTGCTT CAAGTAACAA TAAGCTCTCA
ATTCTAAGAG AGATGGAAGT ATCAATGCTT GTCTCAAAAC TTTATTCAAG TAGACCGATA
AGTTACATAG AAATGCTACA GATGGCAACG GTTAATGGAG CAAAGGCCTT AGGTTTTGAT
AAAGTAGGAA TGATTAAAGA ATCCTATAAA GCTGATCTAA TAATGATTGA TATCAATAAT
GAAAACCACA CACCCCACAA TGATATCCTA TCGTCCTTGT GCTTTTCTAC TTATGAATCT
GATATAAAAA ATGTTATTAT AGGTGGTAAT ATTGTATATA GAGATGGAAA GTTTAATAAT
GACGATAGCG AAAATATAAT ATTAAAAACA AAAAGACAAT TCGAAGATCT TAAGGCTAGA
TAA
 
Protein sequence
MNILIKNTQL LTMEDEEIKT ANIYIEDDKI SYIGSREDFK SDRVIDGKNF LTMPGFVNAH 
THVAMTLFRN YGPETDLMTW LNDYIWPLED KLKAEDVYYG SKLALLEMIK AGTTSFADMY
FFCEETAKAC KEMNIRSQIS RGLAIPDHGF SKIKENIDLA NKYREDKLID IGLGPHAVYT
SDLDYLKKIS DYAQEYKLPI HIHLSETKKE NEDCYKNYKM SPTELFDKAG IFKNRTIAAH
GVYLSDNDLD IIKENNVSVV HNPSSNLKLS SGFLDLARLI DKGINVCLGT DSASSNNKLS
ILREMEVSML VSKLYSSRPI SYIEMLQMAT VNGAKALGFD KVGMIKESYK ADLIMIDINN
ENHTPHNDIL SSLCFSTYES DIKNVIIGGN IVYRDGKFNN DDSENIILKT KRQFEDLKAR