| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0932 |
|---|
| Symbol | |
|---|
| ID | 8397718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 998319 |
|---|
| End bp | 998891 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644995279 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_003152681 |
|---|
| Protein GI | 257066425 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0452437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATT ATAAATTATA TAAGGATAGA TTGATTTCAG ATATTGGTGA GAAAAGATAT
AAACATAGTC TTAGAGTTAT GGAATGTGCA GAAAAATTAA GCCGAGGACA GAATGTAGAT
AAGGAGAAGG TGAAAACTGC TGCTTTCCTA CATGACTGCG CAAAGTATAA CGAAGAAAGA
TACATGAAAG AGCTTAATGT AGACAATTTT AAGGAAATTG ACCCTGATTC ATCAAAATCT
GTAATTCATT CTTTTTTGGG AGCAGAAGTC GCTAAAAAAG TGTATAATAT TAAAGATGAG
GAGATATTAA AAGCTATCAA ATATCATACT ACCGGAAAGG AAAATATGAG TCTTTTAGAA
AAAATTGTAT TCTTAGCTGA TGCAATAGAG GATAAAAGAT CATATCCTGG AGTAGATGAA
ATTAGGAGTA AATCATTAAT CGACCTAGAT GCAGGAGTTT TGGAATGTTT AAACCACAAC
ATAAAATACC TAATAGATAC AGATGCTTTT ATTGATCCTT TAACACTTAG GGCAAGAAAT
TATTTAATAA AGGAGAAAAA TGGAAAAGCT TGA
|
|---|
| Protein sequence | MFDYKLYKDR LISDIGEKRY KHSLRVMECA EKLSRGQNVD KEKVKTAAFL HDCAKYNEER
YMKELNVDNF KEIDPDSSKS VIHSFLGAEV AKKVYNIKDE EILKAIKYHT TGKENMSLLE
KIVFLADAIE DKRSYPGVDE IRSKSLIDLD AGVLECLNHN IKYLIDTDAF IDPLTLRARN
YLIKEKNGKA
|
|---|
| |