Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0923 |
Symbol | |
ID | 8397709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 991840 |
End bp | 992745 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 644995270 |
Product | exonuclease-like protein |
Protein accession | YP_003152672 |
Protein GI | 257066416 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3359] Predicted exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000308008 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACAC TAAAGAAAAG ATATGAAGCT AAAAATTTAA AAGAAGATGA AATTATTTTA GATATAGAAA CTACGGGCCT TGACTCTTCT ATAGATAGCC TTGTATTGTT AGGTATAATT GAAAAAATAG ATGGTAAGGC TTATATTTAC CAATATTTTG CCCAAGATGA TAGTGAGGAG CAAAGATTAC TTGAAATTTA TAAGAGAAAA ATATCAGATA AAAAAGTAAT CACCTATAAT GGTGATACCT TTGATATACC TTTCTTAAAT AATAGGCTTA TAAAACACAA AGACTTCCCT CTACTACCAC AAGATTTGGA CTTACTTAAG CTAATAAGGC CCTACAACAA GTTTTTTGAT TTTGAATCAC TTAAGCTTAA TGATATTGAG AAACTTGCAG GTTTCTATAG GAATGACCCT TCACGTTACA AAACTTTCAG CAAATTAACT AATGATTTGA AAAGGCGTAC AAATCCTTAT CCTATAATGA AGCATAATGA AAATGATCTT ATTGCAACCG AGAAGATTGT CTATATAGAA AAATACTTTG AAGATAAACT TTCAATTGAT TCTAATTTAT CTCCTATAAC TTTATTAAAC TGTGATATAA ATAACGACGT TGCAAGAATT TCTCTAAGGT CTCAAAATCT TCTAAAAGAA TCTTATTTTA ATGGAGAAAA TTATGAATTA ATAATAAAAG GAAGAACAAT TATAATCAAT TTACAAGTTT TATATGGAAT TCTTAATAGG GATGTTAAAG GCTATGTAAG TATAAATAAT TTTGAGATCA AAAATGAGAC AAGTCTCAGT ATTGACGAAC ATTTCCTAAT AATAAGAGAA AATTTCAAAT ATAATCACAA AAATCTTCTT ACTTTAGCAA AAAAAATAAT CGAGAGTCAT CTCTGA
|
Protein sequence | MITLKKRYEA KNLKEDEIIL DIETTGLDSS IDSLVLLGII EKIDGKAYIY QYFAQDDSEE QRLLEIYKRK ISDKKVITYN GDTFDIPFLN NRLIKHKDFP LLPQDLDLLK LIRPYNKFFD FESLKLNDIE KLAGFYRNDP SRYKTFSKLT NDLKRRTNPY PIMKHNENDL IATEKIVYIE KYFEDKLSID SNLSPITLLN CDINNDVARI SLRSQNLLKE SYFNGENYEL IIKGRTIIIN LQVLYGILNR DVKGYVSINN FEIKNETSLS IDEHFLIIRE NFKYNHKNLL TLAKKIIESH L
|
| |