Gene Apre_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0922 
Symbol 
ID8397708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp991169 
End bp991849 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content32% 
IMG OID644995269 
Producturacil-DNA glycosylase 
Protein accessionYP_003152671 
Protein GI257066415 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000179843 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAC AAATTGGAAA TGATTGGGAT CAATTACTAA AAGAGGAGTG GGAGAAGCCT 
TACTACAAAA ATCTCAGAAA GTTTTTGATT AATGAATATA AGCATTATAA TATATATCCC
GATATGTATG ATCTTTTTAA TGCGCTAAAA TATGTAAGTT ATGAGGATAC GAAAGTCGTA
ATTCTAGGAC AAGATCCCTA TCACGGTAGG GGTCAAGCTC ATGGATTTTC ATTTTCTGTA
AAAGAAGATG TGCCCATACC ACCTTCCTTA TTAAATATAT ATAAGGAGCT TAATAATGAT
TTAGGTCTTT TTATACCAGA TAATGGAGAT TTAACCAAGT GGGCTGAACA AGGAGTTTTG
CTTTTAAACA CAGTTCTTAC TGTAAGAGAA AAATCTCCTA ACTCCCATAA AGGAAAAGGC
TGGGAGATAC TTACTGATAG AATAATAGAG TTATTGAATA AACGTGAAAA GCCTATGGTA
TTTATTCTTT GGGGAGCAAA TGCAAAATCA AAGGAAAGAT TAATTACCAA TAAAAATCAT
CTTATCTTAA AATCAGTACA TCCTTCGCCT TTATCGGCTT ATAGAGGATT TTTTGGATCA
AAAGTTTTTT CTAAGACAAA TGAGTTCTTA AAAGCAAATA ATATGGAAGA AATTGACTGG
CAAATCGAGA ATCAGAGATG A
 
Protein sequence
MSVQIGNDWD QLLKEEWEKP YYKNLRKFLI NEYKHYNIYP DMYDLFNALK YVSYEDTKVV 
ILGQDPYHGR GQAHGFSFSV KEDVPIPPSL LNIYKELNND LGLFIPDNGD LTKWAEQGVL
LLNTVLTVRE KSPNSHKGKG WEILTDRIIE LLNKREKPMV FILWGANAKS KERLITNKNH
LILKSVHPSP LSAYRGFFGS KVFSKTNEFL KANNMEEIDW QIENQR