Gene Apre_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0907 
Symbol 
ID8397693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp976557 
End bp977675 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content37% 
IMG OID644995254 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_003152656 
Protein GI257066400 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAA AATATGAATT AATAAAAAAA GATAAATACT CAAATGCTAG GGTTGGAGTC 
ATTCACACTG CCCACGGAGA TATACCTACA CCTATTTTCA TGCCGGTAGG AACCTTGGGT
ACTGTAAAGA CTATGACACC AGAAGATCTC CTAGGTATGG GAGCAAAGAT TATTCTTGGT
AATACCTATC ACCTTTATCT AAAACCTGGT ATGGATATTA TGAAAAAGGC TGGAGGTCTT
CACAAATTTA TGAATTGGGA TAAGCCAATC CTTACTGATT CTGGTGGATT TCAAGTATTT
TCCCTATCGG ACAACAGAAA AATAACTGAA GAAGGAGTAA CCTTTAGATC TCATATTGAT
GGATCTAAGC ATCTTTTTAC TCCAGAGAAA TCAATAAGCA TACAAAACGA CATACATTCA
GATATTATGA TGAGCTTCGA TGAATGTGTT GATGCAAGAG CTGATTATGA CTATGTAGAA
AACTCTATGA AAAGAACTCT GAGATGGGCG AAACGCGGTC TCGATTATCA TAAAGAGCAT
TCTCATCCGG ACCAATCCTT ATTTGGTATA GTTCAGGGTG GCATGTTTAA AGACCTTAGG
GAGAGATCTG CAAGAGAAAC TACAGCTATG GATTTTGATG GATTTTCAAT TGGAGGGCTT
TCCGTAGGTG AGACTAAGGA AGAAATGATC GATATACTAA ACTTTACAAC ACCTTTTCTA
CCAAAAGATA AGCCTAGGTA TAATATGGGA GTAGGAACTC CTGATTATCT GTTTGAGTCA
TTCGAAGCAG GAATTGATAT GGCTGATTGT GTCCTTCCAA CAAGAATTGC AAGAAACGGA
ACAGCCCTTA CTTCTAGAGG AAGGCTTGTT GTAAAAAATG CCGCTTATAA GGAAGACTTC
ACATCCCTTG ATCATGAATG TGATTGCTAC ACTTGTAGGA ACTATTCAAG AGCTTATATA
AGACACCTCA TGAATGTAAA TGAAATTCTT GGGGCAAGAT TACTCTCTTA TCACAACTTA
TATTTCTTAT TAAAAATGTG CGAAAATATC AGGGAAGCTA TTATGGAAGA CAGGTTCTTG
GATTATAAGA AAGAATTCTA CGATAAATAC GGATATTAA
 
Protein sequence
MALKYELIKK DKYSNARVGV IHTAHGDIPT PIFMPVGTLG TVKTMTPEDL LGMGAKIILG 
NTYHLYLKPG MDIMKKAGGL HKFMNWDKPI LTDSGGFQVF SLSDNRKITE EGVTFRSHID
GSKHLFTPEK SISIQNDIHS DIMMSFDECV DARADYDYVE NSMKRTLRWA KRGLDYHKEH
SHPDQSLFGI VQGGMFKDLR ERSARETTAM DFDGFSIGGL SVGETKEEMI DILNFTTPFL
PKDKPRYNMG VGTPDYLFES FEAGIDMADC VLPTRIARNG TALTSRGRLV VKNAAYKEDF
TSLDHECDCY TCRNYSRAYI RHLMNVNEIL GARLLSYHNL YFLLKMCENI REAIMEDRFL
DYKKEFYDKY GY