Gene Apre_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0895 
Symbol 
ID8397681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp966592 
End bp967290 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content33% 
IMG OID644995242 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003152644 
Protein GI257066388 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AGAAAATTTT AATAGTTGAT GATGAAGATC CAATTAGACA GTTTATGAAG 
ATAAATCTTG ATTATCAAGG TTATCAAACA GTAGAAGCTG CTAGTGGTGA AGAAGCAATT
AAAATTTTTG AAAAAGAAAA ACCTGCACTT GCAATACTTG ATATAATGCT TCCTGGAATG
AGTGGATATG AAGTATGTGA AAAGATAAGG GATGAATCCC CTATGACAGG AATAATTATG
GTTTCTGCTA AATCCCAAGA TATAGATAAA ATCTTGGGCC TAGAAAAGGG GGCTGATGAT
TATATAATAA AGCCTTTCAA CCCACAGGAG TTAATTCTAA GAGTTAGATC GCTTATGAGA
AGAGTTAACC TAAGTCAAGC TAGGCCAAAA GATGATAGTA AGGAAAATTT AACGGATGGA
CCATTTACTC TAGATATTTA TGCCAAAAGC TTTTATAAAA ATAATAAGGA AATAGATGTA
ACCCCAACGG AATTTACAAT ATTACAGAAT TTCATCAAAA ATAAAGGCAA AGCCATGACT
AGAGATGAGA TAATGACTCA AACTTGGGGA GAAAATTATA GCAACGATAC AAAAATTGTC
GATGTAAACA TCAGAAGAAT AAGAGCTAAA ATTGAGGATA ATCCCGCAAA ACCTGAATTT
ATTGAAACAG TCTGGGGTAC AGGTTATAGA TGGAAGTAA
 
Protein sequence
MENKKILIVD DEDPIRQFMK INLDYQGYQT VEAASGEEAI KIFEKEKPAL AILDIMLPGM 
SGYEVCEKIR DESPMTGIIM VSAKSQDIDK ILGLEKGADD YIIKPFNPQE LILRVRSLMR
RVNLSQARPK DDSKENLTDG PFTLDIYAKS FYKNNKEIDV TPTEFTILQN FIKNKGKAMT
RDEIMTQTWG ENYSNDTKIV DVNIRRIRAK IEDNPAKPEF IETVWGTGYR WK