Gene Apre_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0873 
Symbol 
ID8397658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp946169 
End bp947863 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content35% 
IMG OID644995219 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_003152622 
Protein GI257066366 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATA AAGCAATTTA TAAAAAGTGG CTAGAAGATG ATAGATTTGA TGAAGAAACA 
AAAAAAGATC TTTTGAGCAT AAAAGACGAT GATGAAGAAA TAAAAGATCG ATTCCATCAA
TCATTAAAAT TTGGTACAGC TGGTCTTAGG GGTAAGCTAG GCGTTGGAAC CAATAGAATG
AATGTATACA ATGTTGCTCA AGCAAGTCAA GGTTTTGCTG ATACTATAGC AGAAGGTGGC
GAAGAAGCAA AGAAAAAGGG TGTAGCAATT GCTTACGACG TAAGACACAA GTCAGAGGAG
TTTGCAAAAG TAGCAGCGGA AGTCTTTGCT GCTAATGGAA TTAAGGTATA TATACACAAA
GAAATCCAAC CAACACCAGT ATGTTCCTAC ACAATAAGAA AGCTAGGTAA TGTTGCTGGT
GTCATGGTAA CAGCAAGTCA CAACCCAAGA GAATACAACG GATATAAGGC TTACAACCAC
GAAGGAAGCC AAATTTTAGA TGAAACTGCA GATAAAATTC TTGGTCATAT AGCAGAGCAC
CCAGACTTTT TTGAAATACC AAGAATAGAT TTTGCAAAGG GCCTTGAAGA TGGGATCATT
GAATATGTTG ATGACCAATT GATAGAAGAT TATATCAAGG AAGTTTTATC TTGCACAATC
AATGATGAAG ATATAGATAA AAGCATTAAC GTTGTCTACA CTCCACTAAA TGGATGTGGA
AACAAGCTAG TTAGAAGAAT TCTTGACGAG AGAGATTTCA AGAATATCCA TATAGTTAAA
GAGCAAGAAA AGCCAGACCC TGACTTTACA ACTGTTGGAT ATCCTAACCC AGAAGATCCA
AAGGCCTTTA AATACTCTGA AGAACTAGGC AAGAAAGTAT CTGCAGAGCT TTTACTTGCA
ACAGATCCTG ACTCTGATAG ATGTGCGGTA GAAGTTTTGG ATAAGGATGT AGAATACAAA
TTCCTAACAG GTAACCTAAT TGGATCCCTA TTGACAAATT ATATACTAGA AGCACTTGAT
GGAAATAATG AATTACCAGA AAATGGTGCT GTAGTTAAGT CATTGGTATC AACAGACTTA
GTTAAGCCTA TTGCCAATAA ATATGGAGTA AAAGTATATG ACGTCCTAAC AGGATTTAAG
AATATCTACG CAGTAGCAAA CGAGCTAGAT GAAAATAAGA GTGGTAAATT TATATTTGGA
TTTGAAGAAA GTATAGGCTA CAATTACAAG GATTTCGTTA GGGATAAAGA TGCTGTAAAC
TCTGCAATGA TGATTACCGA AATGGCAGCT TATTACAAGG CCAAGGGTAA GAGCTTACTT
GATGTGATAA ATGAATTATT TAATGAGCAT GGATACTATT CAAATGAAGT TGTTTCTATT
GTTCTTGAAG GTTTAGATGG ACAAGAAAGA ATTTCTAGAA TAATGACAGA AGTTAGAAAC
AATCCTATTA AAGAAGTTTG TGGACTAAAA GTTAAAAATA TCATAGACTA CCAAAATGAT
AATACAGGAC TTCCAAAGTC AAATGTTTTA AAATACTACC TTGAAGATAA TTCATGGTTT
GCCCTAAGAC CTTCAGGAAC CGAGCCAAAA ATAAAAGTCT ACATTAATGC AATTGATGAT
AGCCTAGAGG CTTCTGAGAA GAAATTAGAA AATATAAATA AGTTTATGCA AGATGTTATA
GATTCAATTG AATAA
 
Protein sequence
MDYKAIYKKW LEDDRFDEET KKDLLSIKDD DEEIKDRFHQ SLKFGTAGLR GKLGVGTNRM 
NVYNVAQASQ GFADTIAEGG EEAKKKGVAI AYDVRHKSEE FAKVAAEVFA ANGIKVYIHK
EIQPTPVCSY TIRKLGNVAG VMVTASHNPR EYNGYKAYNH EGSQILDETA DKILGHIAEH
PDFFEIPRID FAKGLEDGII EYVDDQLIED YIKEVLSCTI NDEDIDKSIN VVYTPLNGCG
NKLVRRILDE RDFKNIHIVK EQEKPDPDFT TVGYPNPEDP KAFKYSEELG KKVSAELLLA
TDPDSDRCAV EVLDKDVEYK FLTGNLIGSL LTNYILEALD GNNELPENGA VVKSLVSTDL
VKPIANKYGV KVYDVLTGFK NIYAVANELD ENKSGKFIFG FEESIGYNYK DFVRDKDAVN
SAMMITEMAA YYKAKGKSLL DVINELFNEH GYYSNEVVSI VLEGLDGQER ISRIMTEVRN
NPIKEVCGLK VKNIIDYQND NTGLPKSNVL KYYLEDNSWF ALRPSGTEPK IKVYINAIDD
SLEASEKKLE NINKFMQDVI DSIE