Gene Apre_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0787 
Symbol 
ID8397569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp887702 
End bp888406 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content34% 
IMG OID644995132 
Productmannosyl-glycoproteinendo-beta-N- acetylglucosamidase 
Protein accessionYP_003152536 
Protein GI257066280 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4193] Beta- N-acetylglucosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.97494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAA GAAATTCTAT TAAAAAATTA ATATGTACGG CCGCTATACT AACTCTAGGA 
ATTACTTTGG CTAACACAAA ATCTTTCGCT GGCTCAAAAG ATAAGAAAGA CTTAATGTAT
TATGGTCTGC AAAAGATTAA CGCCGAAACT TATAATCTTA GAGATATGAA GAAGGAAAGA
TTTGATAAGT TAGATAAGGA TCTTGATAAG GCAATTGAGA TTGGTTGCGA TAATGTCAAT
AGTAAAAGCT ATTTTTATCT TTTACAGGAT ATGCCTTTTA CAGGAAGTGA GCTAGATTAC
GGTTTAGCTG ATACAGGCCT TTATGGTTTG GGTCAAGACT TTAAGGATGT TTCCGAAAAA
TATGGGATAA ATCCATTATT GCTAATGGCT ATGGCCAAGC ATGAAACTGG AAATGGAACG
AGTGATTTGT TTAGAGAAAA GAATAATCTC TTTGGCTTTA ATGCTATTGA TCACGATCCT
TATAATATGG CAAGTAAATT TAAGGATCCA AAAGATTCTA TTGATACGGT TGCCAAGCAT
CTTAAGGAAG AATATTTAGA CAAGAACGGC ACATATTTTA ATGGGGTTTC TGCAAAGGGT
ATAGGAACAT CATATGCTTC TGATCCAGAG TGGTCCCAGA AAGTTAATTC AATGATGATT
GAAATCGCAG ATGAAATGTT AGAAACATAC AGGGCAGGTC AGTAA
 
Protein sequence
MKVRNSIKKL ICTAAILTLG ITLANTKSFA GSKDKKDLMY YGLQKINAET YNLRDMKKER 
FDKLDKDLDK AIEIGCDNVN SKSYFYLLQD MPFTGSELDY GLADTGLYGL GQDFKDVSEK
YGINPLLLMA MAKHETGNGT SDLFREKNNL FGFNAIDHDP YNMASKFKDP KDSIDTVAKH
LKEEYLDKNG TYFNGVSAKG IGTSYASDPE WSQKVNSMMI EIADEMLETY RAGQ