Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0787 |
Symbol | |
ID | 8397569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 887702 |
End bp | 888406 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644995132 |
Product | mannosyl-glycoproteinendo-beta-N- acetylglucosamidase |
Protein accession | YP_003152536 |
Protein GI | 257066280 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4193] Beta- N-acetylglucosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.97494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAA GAAATTCTAT TAAAAAATTA ATATGTACGG CCGCTATACT AACTCTAGGA ATTACTTTGG CTAACACAAA ATCTTTCGCT GGCTCAAAAG ATAAGAAAGA CTTAATGTAT TATGGTCTGC AAAAGATTAA CGCCGAAACT TATAATCTTA GAGATATGAA GAAGGAAAGA TTTGATAAGT TAGATAAGGA TCTTGATAAG GCAATTGAGA TTGGTTGCGA TAATGTCAAT AGTAAAAGCT ATTTTTATCT TTTACAGGAT ATGCCTTTTA CAGGAAGTGA GCTAGATTAC GGTTTAGCTG ATACAGGCCT TTATGGTTTG GGTCAAGACT TTAAGGATGT TTCCGAAAAA TATGGGATAA ATCCATTATT GCTAATGGCT ATGGCCAAGC ATGAAACTGG AAATGGAACG AGTGATTTGT TTAGAGAAAA GAATAATCTC TTTGGCTTTA ATGCTATTGA TCACGATCCT TATAATATGG CAAGTAAATT TAAGGATCCA AAAGATTCTA TTGATACGGT TGCCAAGCAT CTTAAGGAAG AATATTTAGA CAAGAACGGC ACATATTTTA ATGGGGTTTC TGCAAAGGGT ATAGGAACAT CATATGCTTC TGATCCAGAG TGGTCCCAGA AAGTTAATTC AATGATGATT GAAATCGCAG ATGAAATGTT AGAAACATAC AGGGCAGGTC AGTAA
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Protein sequence | MKVRNSIKKL ICTAAILTLG ITLANTKSFA GSKDKKDLMY YGLQKINAET YNLRDMKKER FDKLDKDLDK AIEIGCDNVN SKSYFYLLQD MPFTGSELDY GLADTGLYGL GQDFKDVSEK YGINPLLLMA MAKHETGNGT SDLFREKNNL FGFNAIDHDP YNMASKFKDP KDSIDTVAKH LKEEYLDKNG TYFNGVSAKG IGTSYASDPE WSQKVNSMMI EIADEMLETY RAGQ
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