Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0773 |
Symbol | |
ID | 8397555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 873179 |
End bp | 873880 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644995118 |
Product | ABC transporter related |
Protein accession | YP_003152522 |
Protein GI | 257066266 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.805493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTATA TACAACTAAA CAATCTAACA AAAGAATTTA AATCTGGAGA TACTAAGATT GTCGCAAATG ATAAGATAAA CTTCTCTCTA GAGGAAGGAA GGTTATTGAT AATAGTCGGA GCAAGTGGGG CTGGTAAGAC AACTCTTCTT AATCTCATTG GTGGGATGGA TAAGGCTACT AGTGGGGAGA TTCTAATTGA TGGGAAAAAC CTAGTAGGTC TTAGCGATAG AGACCTTACC GAATATAGGA GAAATGATGT AGGTTTTGTA TTTCAACACT ATAATCTCAT ACCAAACTTG ACTGCTCTTG AAAATGTAGA GATGGCTTCA GAAATTTCTG ATAATCCACT AGAAGCAGAA AAAATACTCG AGGAGGTAGG ACTTAGTCAT AGATTAAACA ACTTCCCTTC TCAACTATCA GGAGGAGAAC AACAAAGGGT GGCCATAGCC AGGGCCTTAG CCAAAAATCC CAAGCTTTTA CTTTGTGATG AGCCAACAGG TGCCCTAGAC TATGAGACAG GAAAAAATAT CCTTAGGCTT TTACAAGATG CTTCAAGGAA GATGGGAGCC ACAGTAGTAA TCATAACTCA CAATTCATTA ATAAAACCAA TGGCAGATCA GGTAATAGAG ATCAGAGACG GGAGAGTCGA CAAGGACTAT ATCAATGAAA ATCCTGTTTC AGTTGATGAG ATAGAGTGGT AA
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Protein sequence | MSYIQLNNLT KEFKSGDTKI VANDKINFSL EEGRLLIIVG ASGAGKTTLL NLIGGMDKAT SGEILIDGKN LVGLSDRDLT EYRRNDVGFV FQHYNLIPNL TALENVEMAS EISDNPLEAE KILEEVGLSH RLNNFPSQLS GGEQQRVAIA RALAKNPKLL LCDEPTGALD YETGKNILRL LQDASRKMGA TVVIITHNSL IKPMADQVIE IRDGRVDKDY INENPVSVDE IEW
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