| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0770 |
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| Symbol | |
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| ID | 8397552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 869804 |
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| End bp | 871930 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644995115 |
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| Product | ribonuclease R |
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| Protein accession | YP_003152519 |
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| Protein GI | 257066263 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.246847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTAA AAGATATAAT ATTAAATATA GTATATGATG AAAATTATCT GCCAATGACA
TTTAAGGAAT TAGATAAGTA TCTTAAGGTG GACAAATATA CTAGAAAGGC TGTTAGAGAT
ATCATAAAAG ACTTGGAGAA AGAAAATAAA ATTCGAGTTT CCAATAAAAA GAGAATTATG
CCTCTAACAG ATGATGAGAT TAATCTAATT GGTAAAATAT CCATGGCTCA AGCTGGGTAT
GGATTTTTTA TTTCCGATAA TAGAGATTTC GAAGATGTTT TTATAAAAAG AGACAATATG
AATAAGGCCC ACAATAATGA TAGGGTCAAA ATCGAGCTTA TTAAGAGAAA AGAGAAGGGA
AGAAAGGCCG AGGGAAGAGT AATAGAAATT ATTGAAAGAG CTAAAGATGA AATAGTTGGA
AGCTTTCAAA AAAATAAGGG CTTTGGCTTT GTAATTCCAG ACGATAGAAG TTACGGTGAA
GATATATTTA TAGCTGAAAA GTTCTTTAAT AAGGCAAAAA ATAAGGATAA GGTAGTTGTT
GAGATTATAA ATTATCCAAA AGACGGTAAA CCTGAAGGAA GAATTAAGGA AATTATCGGC
GGTAAGAACG ATAAGAATAT TGAAATCCTA TCTCTCATCA GGGCCCACGG CCTTCCTTAC
CAATTCTCAA AGGAGACTAA GAAGGAAAGT CTTTACGTAA AGGATACGGT TAATGAAATA
GAACTTGAAG GAAGGAAGGA CTTAAGAGAT CTCTTCACAG TTACGATTGA TGGTAGAGAT
TCCAAGGACT TTGATGATGC TATTTCTATA GAGAAAAATG GAGAAAACTA TGACTTGTAT
GTTCATATTG CAGACGTTGC CCACTATGTT AAAAAAGGAA CTGCCATCGA TAATGACGCC
TATGAGAGGG GAAACTCTAC TTATCTATTT AATATCGTAA TTCCCATGCT ACCAGAGGTC
CTATCAAATG GGATCTGCTC TCTAAATCCC AATGAGGATA GGCTTGCCAT AAGCTTAAAG
ATGACAATCA ATGATAAGGG CAAGGTTATA GATAATGAGT TTTATGAGTC AGTTATTAAT
TCTGATCATA GATTGGTGTA TGACGATGTA AATGCATTTT TGGATAAGAA TGATGAGAAT
GTATATGAAG ATGAGCTTAT AAAAGAAAAG TTAAGGATTT TTGATGAGCT TAGGGAAATC
CTAAATACTA TGAGAGAAAA AAGAGGATCA ATCGACTTTA ATTTCTCTGA AAGTCAGATA
GATGTAGCTG AGGATGGAAG AGTTTTAAAT ATATCAAACT TTGAAAGAGG ATCGGGCAAT
AAGATGATTG AAGAATTCAT GCTTGCCGCT AATGAAACAG TTGCAAGTCT TTTTGCCTAT
ATGGACTTTC CTTTTATATA CAGAATCCAC GAAAAACCTA AAGAAGAAAA GATCGAAAGC
TTTAAGAAAG CTCTTAACAC TATGGGATAT AATATAAGGG GAAATGACCT ACATCCTAAG
GACTTCCAAC AAATTCTAGA AGAAGTGGAA GGTAAGGACG TTGAATCAGT AATTAATATC
TTGATGCTAA GGACCATGCA GAAGGCCAAG TATTCCGAGC ATAGGGATAT GCACTTTGGT
CTATCTACAT CCTTCTACAC CCATTTTACG TCCCCAATTA GAAGATACCC TGACCTAATA
GTTCATAGAT TAGTCAAAAA ATTCATTCAT AACAAGCTAA CTAGTCTTAA TCAGACAAGT
CTTGAAAAAA CAATCACAAA TAATGCAGAC CACCTTTCTA TGACAGAAAG AAGAAGCGAA
GATTGTGAGA GAGATGTGGA AGATTTACTT AAATGTAAGT ATATGACTCG TTTTATTGGC
GATGAATTCT ATGGAAATAT ATCTGCAATA ACTGAATTTG GCATATTTAT TGAATTAGAT
AATACTGTAG AAGGACTTTT CATGTACAAG TTTTCTAATG ATAGATACGA GTATCTAGAA
GATAAGATGA AAGCCTTTAA TACAGATAAA AAAATCTTCT ATTCGATTGG AGATAGGGTT
AAGATTAGGG TGATGGATGT AGACACATAT CAGAGAAATA TCGACTTTGA TTTGGAGGTA
AACGATGAAA TTATTAGCCA ACAATAA
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| Protein sequence | MNLKDIILNI VYDENYLPMT FKELDKYLKV DKYTRKAVRD IIKDLEKENK IRVSNKKRIM
PLTDDEINLI GKISMAQAGY GFFISDNRDF EDVFIKRDNM NKAHNNDRVK IELIKRKEKG
RKAEGRVIEI IERAKDEIVG SFQKNKGFGF VIPDDRSYGE DIFIAEKFFN KAKNKDKVVV
EIINYPKDGK PEGRIKEIIG GKNDKNIEIL SLIRAHGLPY QFSKETKKES LYVKDTVNEI
ELEGRKDLRD LFTVTIDGRD SKDFDDAISI EKNGENYDLY VHIADVAHYV KKGTAIDNDA
YERGNSTYLF NIVIPMLPEV LSNGICSLNP NEDRLAISLK MTINDKGKVI DNEFYESVIN
SDHRLVYDDV NAFLDKNDEN VYEDELIKEK LRIFDELREI LNTMREKRGS IDFNFSESQI
DVAEDGRVLN ISNFERGSGN KMIEEFMLAA NETVASLFAY MDFPFIYRIH EKPKEEKIES
FKKALNTMGY NIRGNDLHPK DFQQILEEVE GKDVESVINI LMLRTMQKAK YSEHRDMHFG
LSTSFYTHFT SPIRRYPDLI VHRLVKKFIH NKLTSLNQTS LEKTITNNAD HLSMTERRSE
DCERDVEDLL KCKYMTRFIG DEFYGNISAI TEFGIFIELD NTVEGLFMYK FSNDRYEYLE
DKMKAFNTDK KIFYSIGDRV KIRVMDVDTY QRNIDFDLEV NDEIISQQ
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