Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0750 |
Symbol | |
ID | 8397532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 850581 |
End bp | 851885 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995095 |
Product | transcription termination factor Rho |
Protein accession | YP_003152499 |
Protein GI | 257066243 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000755075 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATT TAAAAGATAA AAAACTAGTA GAATTAAAAG AATTGGCCAA AGAAATGGGC ATCGAATCTA TAAGTAAATA TAGAAAAGAT GAACTCATCA AGCTAATTGA GGAAGAAGAA GCAAATAGAA ACGAAGAGAA AAAAGAAGAA GCTGAAAATG ATCTAGGTCA AAAGTTCGAT TGTGATGGAA TCCTGGAAAT CTTACCAGAT GGATATGGCT TCCTCCGTAC TCAACTTTAT GAAAGTGGAG ATGACGATAT ATATGTTCCA CCTAAGCAGA TTAAAATGTT TAGACTAAAG ACAGGTGATT ACATAAGAGG AATCGCAAGA GAAAAACATG CTAGAGATAA GTTCGCACCG CTAATTTTTG TATCTGATGT TAACGGCATC AATCCAGGAG TTGCCTATAA TAGGCCATAT TTTGAAGATC TAACCCCAAT TTACCCAAAA GAGAAAATAT CCTTAGAAAC AAGTAAGGAT CACTTTTCTG AAAGAATCAT AGATTTTATA AGTCCAATAG GTCGTGGCCA AAGAGGTTTG ATTGTCTCCC AACCCAAGGC AGGAAAGACC ACTCTCATCA AAGATATTGA AAGATCAATA GAAAAAAATT ATGACGATAT CAAAATAATA GTTCTATTAA TAGATGAAAG ACCAGAAGAG GTAACTGACT TTATTCGCTA TGTAAACAAA TATAGGGATC CAGAAAACGA GCTTATGCGT ACAGAAGTTG CAGCATCTAC CTTTGATAAA ACACCCCAAA GCCATATAGA CATGGCGGAG ATGGTTCTAG AAAGGGCCAA GAGATTCGTA GAAGAAAAAA AGGACGTTGT AATACTTTTA GATTCAATAA CTAGACTTGC TAGGGCTTAC AATATTATGA CTCCACAATC TGGAAGGACT CTATCTGGAG GACTTGACCC CCTAGCTCTT GTAGGACCAA AGCAATTTTT TGGCGCAGCT AGAAACATAG AAGATGGCGG CTCCCTTACC ATACTTGCTA CAGCATTAGT CGATACAGGT TCTAGGATGG ATGATATGAT CTTTGAAGAG TTTAAGGGAA CTGGTAACAT GGAAATTCAC TTAGACAGAA GACTTGCCGA TAGGAGAATA TTCCCAGCTA TTAATATAGA GAAGTCTTCT ACAAGAAGAG AAGATCTACT CCTTACAGAT AAGGAACTAG AGGCAGTAAT CAAGTTAAGA AAGTCCAATA TGAATAACGC AGAATCCATA GTCGAGTTAA TAGATTGGAT GAGAAGAACA GAAGATAACA AGAAGTTTAT AGAATTGATA AATAATTCAT ACTAG
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Protein sequence | MDNLKDKKLV ELKELAKEMG IESISKYRKD ELIKLIEEEE ANRNEEKKEE AENDLGQKFD CDGILEILPD GYGFLRTQLY ESGDDDIYVP PKQIKMFRLK TGDYIRGIAR EKHARDKFAP LIFVSDVNGI NPGVAYNRPY FEDLTPIYPK EKISLETSKD HFSERIIDFI SPIGRGQRGL IVSQPKAGKT TLIKDIERSI EKNYDDIKII VLLIDERPEE VTDFIRYVNK YRDPENELMR TEVAASTFDK TPQSHIDMAE MVLERAKRFV EEKKDVVILL DSITRLARAY NIMTPQSGRT LSGGLDPLAL VGPKQFFGAA RNIEDGGSLT ILATALVDTG SRMDDMIFEE FKGTGNMEIH LDRRLADRRI FPAINIEKSS TRREDLLLTD KELEAVIKLR KSNMNNAESI VELIDWMRRT EDNKKFIELI NNSY
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