Gene Apre_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0682 
Symbol 
ID8397463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp781630 
End bp783534 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content28% 
IMG OID644995037 
Productsuperfamily I DNA and RNA helicase-like protein 
Protein accessionYP_003152442 
Protein GI257066186 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGC TAACATTGGA AAAAGAAGTA TTAGAAGCTC TTGAATGTAT AAAAAATGGT 
GAAAATTTTA TTTTAGAAGG TGGAGCAGGT AGTGGAAAAA CATACTCCTT AATTTCCTTA
ATAAATGCAC TCACAGAGGA ATTACCAGAT ATAAAGATAG TATGCATTAC ATATACAAAT
AATGCAGTTG CCGAAATTTT ATCAAGAATA GAAAATGAGA ATATTTGGGT TTCAACAATA
CATGAGTTTA TATGGTCTCT TATCAGAAAA TATCAGAATG AAATAAAAAA TATTTTAGTT
GAGCTTATTA ACGATGATAA TGAAAAGAAC TTTAAAAAGC CAAAAGATTT TTCTGAGGAT
TTAATTTCTA AAGAATATTT CGAAAATCTT TATGTAGATT ATGATGAGTA TTATTCTGTA
ACGCCAAATG AAGAAAATAG AGTTAAAATC AGCCATAATC ACATTTTGAT TGTTGCGGAG
AAAATGTTTG AGAAATATAA AAAAATAGCG GACATTTTAA AGGATATTGC AGATTGTATT
TTTGTTGATG AATATCAGGA TACAAGTCCT TTAGTTGCTG ATATTTTACT AAAGCATCTT
GAGCAAAGCG ATAAGAAAAA TGTAATTGGT TTTTTTGGAG ATTCAATGCA GTCTATATAT
GACGACGGAG TTGGTAATTT AAATCAATAT AATTTAACTA AAATAGTAAA GACGCAAAAC
CGAAGAAATC CAAGAGTTGT AATCGAAGTA GCCAATAAGT TTAGAGATGA TGATATTGAG
CAAAGACCTT CAGAAGATAT AAATGCACCT AATATGGAAA ATGGTACTAT TAGAGAAGGT
AGTATTAAAT TTTTATATGG AACTGAAATA AATGATTTTA TAAGTGTAAA GGGGAAGAAT
ATTTTTGAAT CTTGGGATTT TTCTGATGGA AAACAAACAA AAGAGTTAAG GCTAACACAT
AAATATAATG CTGAAATGAC TGGCTTTAAA GACTTATATG ATCTATATAA TGCTGATTTG
ATAACTAAGC TTATAAGTGG GATAAAGAAA AAAATTGATA AGGGAAATTT AGACTGTAAT
AAGACTTTGG GAGAAATAAC GTTAGAGGTA AAACCGACAT ATAACAAAGT GGAGCTGTTA
GATCAAATTA ACGGAAATGA AATTTATCAG TCAATATATA GTGTTTTAGA AGATATGTCA
TGGGAAGAAG CTTACGAAAA ATGTAGAATC ACTAAGGAAT CACTCATGTC ATATAAATTA
AATGGAATGA GTGGTAGATA TGAAGCTAAT TCTTATAGAG ATAGGATTTT ACGCAGATTA
GATATATTAG AGGAGATTAT TGAATTATAT GAGGCTAATA GATTTAATGA TTTTCTACGA
ATAACAAAAT TTTCTATTCA TAATAGAAAT GATAAGATTT GCCTTAAGCA AGCAATTGAT
TATCTTGTAA GTGAAGATAA TCAAACGATA GAAAATGTAT TAAAATTTGC GGAAGTAAAA
GGGTTACTCA AAGAAGATGA ATTGTTTAGT GATTATATTT CAAATAAAGG GTTTTATTTA
TGGGAGAGAA TAAAAAAGAT AACATTTAAT CAATATAGAA AAAGTGTTTT ATATTTAAAA
GAATTTTCAC CAATTTGTAC TCAACATAGT GTTAAAGGTA GTGAATATGA CAATGTATTG
CTTGTATTAG AGTCTGATTG GAATAAATAT GACTTTAGAA CATTATTTGG GAAAGGATCT
CCGAACTCTA ATGTTCAGAA ACGTACAAAA AAATTATTTT ATGTATGTAT AACAAGAGCA
AAAAAGAATT TAATAATATA TATGCCTACT GATGATTCTG ACATATTAGA AAAAGCTAAA
GAGTATTTTG GAGAAGAAAA TGTTATAGAA CTCTCTTCGA TTTAA
 
Protein sequence
MDTLTLEKEV LEALECIKNG ENFILEGGAG SGKTYSLISL INALTEELPD IKIVCITYTN 
NAVAEILSRI ENENIWVSTI HEFIWSLIRK YQNEIKNILV ELINDDNEKN FKKPKDFSED
LISKEYFENL YVDYDEYYSV TPNEENRVKI SHNHILIVAE KMFEKYKKIA DILKDIADCI
FVDEYQDTSP LVADILLKHL EQSDKKNVIG FFGDSMQSIY DDGVGNLNQY NLTKIVKTQN
RRNPRVVIEV ANKFRDDDIE QRPSEDINAP NMENGTIREG SIKFLYGTEI NDFISVKGKN
IFESWDFSDG KQTKELRLTH KYNAEMTGFK DLYDLYNADL ITKLISGIKK KIDKGNLDCN
KTLGEITLEV KPTYNKVELL DQINGNEIYQ SIYSVLEDMS WEEAYEKCRI TKESLMSYKL
NGMSGRYEAN SYRDRILRRL DILEEIIELY EANRFNDFLR ITKFSIHNRN DKICLKQAID
YLVSEDNQTI ENVLKFAEVK GLLKEDELFS DYISNKGFYL WERIKKITFN QYRKSVLYLK
EFSPICTQHS VKGSEYDNVL LVLESDWNKY DFRTLFGKGS PNSNVQKRTK KLFYVCITRA
KKNLIIYMPT DDSDILEKAK EYFGEENVIE LSSI