Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0673 |
Symbol | |
ID | 8397454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 768488 |
End bp | 769210 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644995028 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003152433 |
Protein GI | 257066177 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00206907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAAAA AATATATGAA AAGATATCCC CTAAAGGATG TCCAAAACGC CAGAGACTTA GGTGGAGTAC CAACACTTGA TGGCAAGGTG ACAAACTGGG GGAAATTTAT TAGAACAGCG ACTCTAGATG ATGCGAAAGA TTGGGACATT AACTACCTTA AGGAAATGGG AGTTACTAGA GTAATAGACT TAAGGCGTGA AGGCGAGATT GAGCCAAATA AGAAAAGTAT TGCCAAAATC AAGGAGAACT TCGACTATTA CAACGTTTCT CTTGCAGGAG ATAGGGAGTT TAGACAAGAA GATATAGACA AAATTGTAAA TAAAGAAATA TCAGTAGGAA CAAGCTATAG GAATCTGATT GATAACTATA AGGCAGTCAA AGAGATTATG GAAATATTCG CTGAGAATGA TGGGATAAGC CTATTTCACT GCCAAGAGGG TAAGGATAGG ACAGGGATTA TTTCTATGAT TCTTATGGGG ATTTCTAATG TGGCGAGAGC TGATATTATA GCAGATTATG AAGTAAGTTC GGCCCATCTT GGTTATATCG AAAGATATGA TGAGGATGAT CCTTTTTCTG TATTTAGGAT TACAAGTCCT TACAATATGA AGGAAGCCTA CGATTACATT CTAAGAAAAT ATAAGTCATT CGATGATTAT CTTCTCTACG CCAAGGTTGA TAGGGAAACA ATAGAAAAAG TGAGGGACAA AATAGCTGGA TAG
|
Protein sequence | MVKKYMKRYP LKDVQNARDL GGVPTLDGKV TNWGKFIRTA TLDDAKDWDI NYLKEMGVTR VIDLRREGEI EPNKKSIAKI KENFDYYNVS LAGDREFRQE DIDKIVNKEI SVGTSYRNLI DNYKAVKEIM EIFAENDGIS LFHCQEGKDR TGIISMILMG ISNVARADII ADYEVSSAHL GYIERYDEDD PFSVFRITSP YNMKEAYDYI LRKYKSFDDY LLYAKVDRET IEKVRDKIAG
|
| |