| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0612 |
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| Symbol | |
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| ID | 8397392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 711907 |
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| End bp | 712803 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644994969 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003152375 |
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| Protein GI | 257066119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.259864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGCG GCATTCTAAA TGTAGATAAG GAAAAGGGCA TATCTTCAGC GAGGGTTGTA
TCTCTTGTAA GGCGAGGCTT AAATCAGAAG AAAGTTGGCC ATACAGGAAC CCTTGACCTT
GAGGCAAGCG GGGTCCTTCC TATTGTAGTC GGTAAGGCGA CAAGGGTATC CGACTATATG
ATGGATAAGG ATAAGACCTA CGAATGCCTT ATGGAATTTG GAAAAAAGAC CGACACTCTG
GATGCGGCAG GAGAAGTCAT CAAGGAAAGC TCTAAGACTT GCAAGAGGGA AGACTTAGAA
GAAGTTCTAG AAAAATACAA GGGCGAGATA GAACAAATCC CTCCCATGTA TTCTGCCCTA
AAGGTAGACG GCAAGAAGCT TTACGACCTT GCAAGAAGTG GTAAGGAAAT TGAAAGAAAG
AAAAGAAAGG TCAAGATCTA TGACCTAAAG CTAATTGACT TCGACTTTCC CTATGCCAAA
ATCTCCGTAA CTTGTTCCAA GGGCACCTAT ATTAGAACCC TTGTGGATGA TATAGGAGAA
GATTTAGAGT GCTTGTCTTT TGTTAAAGAG CTTAGAAGGG TAAGGATTGG AGACTTTCTA
GTAGATGAGG CAGTTAAGTC TTCTGATATT TTGGAAATGG ATAAGGATAA GCTTATATCG
AAACTTGAAA GAGTAGATAA GGCCCTAGAT AAGTTTCCGA GATTCGACCT TGCTGATAAT
CTTTTCGATA AGGCCGTAAA TGGCATGACT ATAAAGATAG ACAGTAAAAT AGACGAAGAA
GTTAGAGTAT ACTCGAGAAA TGAATTTATT GGCTTGGCAA AGAGTTTTGA GAGTAGGGGC
GGATATTTTC TAAAGATGGA GAAAGTATTT TATGATAGAG AAAATAAAAA TATATGA
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| Protein sequence | MYSGILNVDK EKGISSARVV SLVRRGLNQK KVGHTGTLDL EASGVLPIVV GKATRVSDYM
MDKDKTYECL MEFGKKTDTL DAAGEVIKES SKTCKREDLE EVLEKYKGEI EQIPPMYSAL
KVDGKKLYDL ARSGKEIERK KRKVKIYDLK LIDFDFPYAK ISVTCSKGTY IRTLVDDIGE
DLECLSFVKE LRRVRIGDFL VDEAVKSSDI LEMDKDKLIS KLERVDKALD KFPRFDLADN
LFDKAVNGMT IKIDSKIDEE VRVYSRNEFI GLAKSFESRG GYFLKMEKVF YDRENKNI
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