Gene Apre_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0579 
Symbol 
ID8397359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp678257 
End bp679003 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content37% 
IMG OID644994938 
Producthypothetical protein 
Protein accessionYP_003152344 
Protein GI257066088 
COG category[S] Function unknown 
COG ID[COG4684] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AATCAATCAG CAGTAGAAAG CTTGTGACAG CGGCAATGCT TGGTGCAATC 
ACCATAGTCC TTAGCCTAAC TCCACTCGGT CTAATTCCTT TAGGATTTAT CAATGCAACA
ACCATGCACA TTCCAGTAAT TATTGGAGCA ATTGCAGAAG GACCTATTGT AGGGGCCCTA
GTCGGACTAA TATTCGGCGT TTCGTCTTTA CTAAATGCCT TACTAAGAAA TCCTAGTCCA
GTTTCTTTTG TCTTCTACAA TCCTTTAATA TCTGTTCTTC CAAGAGTTCT AATTGGAATT
ACTAGCTACT ATGCTTACAA GGCTTGTCAA AATATAGGAG ATAAAAAGCT TAAGAATCTT
TCCAAAATTT TATGGATTGC AATATCTATA GGACTTATCT ACCTACTCTA TAAGAATATT
ACTGAAGGAA AATCCCTTCT AAATATTATT TTCGTAATAA TTCTTCTAGC TGTAGTTATC
GGCCTATTTA TGTATTCTAG AAAATCTAAG AAAGATTTCC CAATAGCAAT TGGTGCTTTC
GTAGGTTCTA TGACCAATAC CATCCTAGTT CTTGGCGGAA TCTACTTAAT CTATGCCGAA
AGCTATGTCA AAACCCTTGG CTTACCAATG GATAGCGCAA GGTCAGCCAT ACTCGGAGTT
ACAATTACAA GTGGTATACC AGAGGCCATT CTTTCTGTTA TACTTTCAAC AGCAGTAATT
AAGGCCCTCA AATCAACAAG GAGATAA
 
Protein sequence
MNKKSISSRK LVTAAMLGAI TIVLSLTPLG LIPLGFINAT TMHIPVIIGA IAEGPIVGAL 
VGLIFGVSSL LNALLRNPSP VSFVFYNPLI SVLPRVLIGI TSYYAYKACQ NIGDKKLKNL
SKILWIAISI GLIYLLYKNI TEGKSLLNII FVIILLAVVI GLFMYSRKSK KDFPIAIGAF
VGSMTNTILV LGGIYLIYAE SYVKTLGLPM DSARSAILGV TITSGIPEAI LSVILSTAVI
KALKSTRR