Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0568 |
Symbol | |
ID | 8397348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 668027 |
End bp | 668941 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644994928 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003152334 |
Protein GI | 257066078 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.415819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTTAA AGGATGATTA TAAATTTATT GGTCCCGATT TGAGGAAAAT TAGGGAAGCA AAGGGTATCA GTAGAAAGGA AATATCAGAA AAGGTCTATG TATCCGAGGA GACTATCCGT CGAATAGAAA AAGGAGAAAA CGACCCTAGG CTTTCTACAC TTATACCTAT ATGTAATTGT TTGGGAATTG AGATTGAAGA TATCATAAAT TCTAGTGGCT TCGAATATAA CAATCTCTTA TCTTTTAGAA GGGAAATCAA TTATCACTTA AATAATTCAT CAATTGAAAA AGCGAGACTT TTGATTTCTA ATCTCAATGA TATAAAAATA AAGTCAAATT TGGACTTTGA AAGAGAGTTT CATGCGACAA AACACTATTT TAATGGAATT TTAGATCTTA AGTCAACAAG GACAGTAGGA TCTAGTTTAG TAGAATTCGA ACAAGCACTT ATTTCATTAG AAAATCGTTT TACCATTAAT AGATTTAAAA ACTATAAGTA TGATAATTTC TCTCTAAGGA TTCTTTTAGC CTTGTCCTTA GCAGAACAAA AGTTTGGCAA TTATCAACTT TATGAAGATA TAAACTTAGA AATAAGTAAG TATCTTAAAT CTTCCCTAGA AGAGTACTTC CTCTTTTCTT ATAATGTAGG CGTATATTAC TATAGGGCGG GTAAAATCAT AGAGTCTTTG GACTTGTGTA ATACAGCTGT AAGTAAGGCC AAAAAGCTAA AGGAAGTTCC GTATCTAAAT ATGGTTTATT ATTTGAAAGG AGTAAACCAT CTAAGTCTTA ACCAATTGGA AGAAGCAAAG CTTAGCTTTA ACTACTGCTT AGCTTTGACT AACATATTTT CAGAAAAAGT ATTAGCAGAA AGAATTGAAA AGCAAATAGA TAACTTACTT TTAAATTATA GATAA
|
Protein sequence | MILKDDYKFI GPDLRKIREA KGISRKEISE KVYVSEETIR RIEKGENDPR LSTLIPICNC LGIEIEDIIN SSGFEYNNLL SFRREINYHL NNSSIEKARL LISNLNDIKI KSNLDFEREF HATKHYFNGI LDLKSTRTVG SSLVEFEQAL ISLENRFTIN RFKNYKYDNF SLRILLALSL AEQKFGNYQL YEDINLEISK YLKSSLEEYF LFSYNVGVYY YRAGKIIESL DLCNTAVSKA KKLKEVPYLN MVYYLKGVNH LSLNQLEEAK LSFNYCLALT NIFSEKVLAE RIEKQIDNLL LNYR
|
| |