Gene Apre_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0566 
Symbol 
ID8397346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp665838 
End bp666956 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content40% 
IMG OID644994926 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003152332 
Protein GI257066076 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.863787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAGA AAAAAGATAC AAAAGTAGTA GTAGGAGTAA GCGGGGGAGT GGATTCTTCT 
GTAGCAGCCT TATTATTAAA GGAAGAAGGC TACGATGTAG TAGGTATTTT CATGAAAAAC 
TGGGATGATA CAGACGAAAA TGGAGTCTGT ACAGCTGAAG TCGACTACGA AGATGCAGTA 
GCAGTATGTA ATCAAATAGG CATTCCTTAT TATTCAATAA ACTTTGAGAA AGAGTATTAC 
GACAGGGTCT TTACCTATTT TCTTGATGAA TACAAGAAGG GTAGGACTCC AAACCCAGAT 
ATAATGTGCA ACAAGGAGAT TAAGTTTAAG GCCTTTTTAG ACTTTGCTAA GTCCTTGGGA 
GCAGATTATG TGGCAACTGG TCATTATGCG AGAGTGGATA GGTCAGGAGA TGAAACAGTC 
ATGCTTAGAG GCCTAGATTC CAATAAGGAT CAGACATACT TCCTAAGTCA GCTTTCCCAA 
GAGCAAATCA AAGACGTCCT ATTCCCAGTT GGAGAGCTTC AAAAAAGTGA GGTAAGGGAA 
ATTGCCCACA AATACAAGCT TGCTACAGCC GATAAGAAAG ATTCTACAGG AATTTGCTTT 
ATAGGAGAAA GAGACTTCAA TGAATTCCTA TCAAACTACC TACCAGCTCA AGCAGGAGAT 
ATAGTAGATA CTGATGGAAA TGTCCTTGGT AAGCATGATG GATTGATGTT TCACACCATA 
GGGCAAAGAA GAGGTCTTGG AATAGGGGGA GAAGGAGAGG CTTGGTTTGT TTGCGGTAAG 
GACTTAAAGA AAAATGAACT CATAGTCTGC CAAGGAAAAA ACAATCCCCT TCTTTTCTCA 
AATAAGCTAT ATGCTAGCGA GTTTTCGACC TTCACCGAGA AAAAAATTCC AAAAGAGTTC 
GACTGCACAG CCAAGTTTAG ATATAGACAA GCCGACATCA AGGCCCATGT AAAAGTCCTG 
GAAGATGGTA AGGTAGAAGT GACTTACGAT AGAACTAAGG CAGTAACACC AGGCCAGGCA 
GCTGTCTTCT ACCAAGGAGA AGTTTGTATT GGATCTGCCA TAATAGATGA GGTCTATAAT 
GATGGAAAAA AAATTATTGG TATAGGTCTA ATAATTTGA
 
Protein sequence
MKEKKDTKVV VGVSGGVDSS VAALLLKEEG YDVVGIFMKN WDDTDENGVC TAEVDYEDAV 
AVCNQIGIPY YSINFEKEYY DRVFTYFLDE YKKGRTPNPD IMCNKEIKFK AFLDFAKSLG 
ADYVATGHYA RVDRSGDETV MLRGLDSNKD QTYFLSQLSQ EQIKDVLFPV GELQKSEVRE 
IAHKYKLATA DKKDSTGICF IGERDFNEFL SNYLPAQAGD IVDTDGNVLG KHDGLMFHTI 
GQRRGLGIGG EGEAWFVCGK DLKKNELIVC QGKNNPLLFS NKLYASEFST FTEKKIPKEF 
DCTAKFRYRQ ADIKAHVKVL EDGKVEVTYD RTKAVTPGQA AVFYQGEVCI GSAIIDEVYN 
DGKKIIGIGL II