Gene Apre_0560 details

Gene Information

• Locus tag: Apre_0560
• ID: 8397340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 659976
• End bp: 660425
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644994921
• Product: transcriptional repressor, CopY family
• Protein accession: YP_003152327
• Protein GI: 257066071
• COG category: [K] Transcription
• COG ID: [COG3682] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR02698] copper transport repressor, CopY/TcrY family

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000680415
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACAC CAGTAGCTAG TACCCATATA ACTGATGCTG AGTGGGAAGT CATGCGTGTG 
ATTTGGGCAA ATGATCGAGT AACTAGTAAA AAGGTCATTT CCGTATTGAA AGAAAAAATG 
GACTGTACAC AATCCACTAT CAAAACGATC TTAGGTCGAT TAGTTGAGAA AGGCGTACTA 
AATACAGAGC AGGAAGGTAG AAAGTTTATT TACACTGCCA ATATTGAAGA GAAAGAAGCC 
GTAAGGGATT ATGCAGAAGA TATTTTTAAC CGTATTTGCC GAAAAAAAGT CGGGAATGTA 
ATAGGAAACA TCATTGAAGA TCATGTCTTA AGCTTCGATG ATATAGATCG ACTAGAAAAA 
ATATTAGAGA TGAAAAAATC TTTCGCAGTA GAAGAAGTGG ATTGCAATTG TCCAGAAGGA 
CAATGCGAAT GTCATTTACA TCATCATTAA 

 

Protein sequence

MSTPVASTHI TDAEWEVMRV IWANDRVTSK KVISVLKEKM DCTQSTIKTI LGRLVEKGVL 
NTEQEGRKFI YTANIEEKEA VRDYAEDIFN RICRKKVGNV IGNIIEDHVL SFDDIDRLEK 
ILEMKKSFAV EEVDCNCPEG QCECHLHHH