| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0550 |
|---|
| Symbol | |
|---|
| ID | 8397327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 636293 |
|---|
| End bp | 637684 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644994908 |
|---|
| Product | glutamate synthase (NADPH), homotetrameric |
|---|
| Protein accession | YP_003152317 |
|---|
| Protein GI | 257066061 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGT TTAATATGGC AAAAACAAAA GTTCCAATGC CAGAACAAGA CCCTGATGTA
AGAAATAAAA ATTTTGACGA GGTAAGTCTT GGATATACAT TAGAAATGGC CAAGGAAGAA
GCTACAAGAT GTATCCAATG TAAAAACAAG CCTTGTGTAT CAGGTTGTCC AGTAGGAGTA
AAAATCCCAG AATTCATCCA CCTAATCCTT GAAGATGACC TAGACGGAGC TTACGACAAA
ATAGCAGAGA CCAACAATCT TCCCGCAATC TGCGGTAGGG TATGCCCACA AGAGGTCCAA
TGTGAAGGAA AATGTACGAG AGGCATAAAA GACGAGCCTG TAGGAATCGG TAGACTTGAA
AGATTCGTTG CAGATTATAG AAATAATAAA AAATACAACA AGCCAATCGA AGTAACTAGC
GTAAATAAGA AGGTCGCAGT TGTAGGAGCT GGCCCTTCTG GTCTTTCTGC TGCAGCTGAC
CTTGCCAAAA GAGGCTACTC AGTAGTTATG TTCGATGCCT TTCACACAGC TGGAGGAGTC
TTAATGTATG GTATACCAGA ATTTAGACTT CCTAAAAAAC TCGTTCAAAA GGAGCTTAAA
AACGTAATAG GTCTAGGTGT CAAACTTCAG ACTAATACGA TCGTAGGAAG GACAATTTCT
ATAAAAGACC TCTTCGATCA GGGATTTGAA GCGATCTACC TTTCTACTGG AGCAGGTCTT
CCAAGATTTT TAGGTATTCC TGGAGAAAAC TTAAATGGAG TATATTCAGC TAACGAATTT
TTAACAAGGA TGAACCTTAT GAAGGCCTAC AAGTTCCCTG AATATGACAC GGCAGTCCAT
ATAGGAAAGA AAGTCTGTGT GGTAGGTGGA GGAAACGTGG CGATGGATGC AGCAAGATCT
GCCAAGAGAA TGGGAGCGGA TGTAACTGTT GTCTACAGGA GAAGCTTCGA AGAAATGCCT
GCAAGAATCG AAGAAAGCCA CCATGCCAGA GAAGAAGGTA TCAAGTTTAT GAATCTTCAC
AATCCAGTAG AAATCATAGG AGAAAATGGC TGGGTTAAGA AGGTAAGGCT TGAGAAAATG
GAATTAGGAG AGCCAGATAG CTCTGGCAGG AGACGTCCTA TAGCTACGGG TGAATTTGAA
GAATGCGAGT TTGAATCTGT AATAATCGCC ATAGGCCAAT CACCTAATCC ACTTATCAAA
AACACCAACT CAGATATAGA TACAGAAAGC TGGGGTGGAA TTATAATAGA TGATAGGACT
ATGACCACAA AGGAAGCTGT CTTTGCTGGA GGAGATGCAG TAAGTGGAGC TGCAACAGTA
ATTCTTGCCA TGGGAGCAGG TAAAAAAGCC GCAGAAAATA TAGATAAATA TTTAAGAGAA
AAAGATAAGT AA
|
|---|
| Protein sequence | MAKFNMAKTK VPMPEQDPDV RNKNFDEVSL GYTLEMAKEE ATRCIQCKNK PCVSGCPVGV
KIPEFIHLIL EDDLDGAYDK IAETNNLPAI CGRVCPQEVQ CEGKCTRGIK DEPVGIGRLE
RFVADYRNNK KYNKPIEVTS VNKKVAVVGA GPSGLSAAAD LAKRGYSVVM FDAFHTAGGV
LMYGIPEFRL PKKLVQKELK NVIGLGVKLQ TNTIVGRTIS IKDLFDQGFE AIYLSTGAGL
PRFLGIPGEN LNGVYSANEF LTRMNLMKAY KFPEYDTAVH IGKKVCVVGG GNVAMDAARS
AKRMGADVTV VYRRSFEEMP ARIEESHHAR EEGIKFMNLH NPVEIIGENG WVKKVRLEKM
ELGEPDSSGR RRPIATGEFE ECEFESVIIA IGQSPNPLIK NTNSDIDTES WGGIIIDDRT
MTTKEAVFAG GDAVSGAATV ILAMGAGKKA AENIDKYLRE KDK
|
|---|
| |