Gene Apre_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0501 
Symbol 
ID8397277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp573401 
End bp574072 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content36% 
IMG OID644994859 
ProductABC transporter related 
Protein accessionYP_003152269 
Protein GI257066013 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0305427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAA TAGCAATTAA TGATTTAAGC TTTGCTTATA GAAAAGAAAA TGTAATTAAA 
TCTTGCAATC TAGAAGTTGA ATCTGGAGAA CTTGTATTAA TCATAGGGGG AAATGGATCA 
GGAAAATCAA CCCTTGTCAA GCTAATGCTA GGAGAGCTAG AGCCTGATAA GGGAAGTATA 
AAGATTTTGG GTAAGGATAT TGCAAAATAC AAGTCCTATA AGAAAATTGG CTACGTTCCT 
CAAGTCAATG TCGTAAACAA AATCGCATTT CCAATAACTT GCTTAGAGCT TGTGGCCCTC 
AACCTATATG AAGACTTTGG CTTTATCAAA ATACCTAAGA AAGTCCACTA TGATAAGGCA 
AGGGATATAC TCATCAAAAT GGGCATGGAG GAATTTATCA ACACACCGGT TAACGAACTA 
TCTGGAGGAC TTGCCCAAAG AGCCATGATT GCCAAGGCTA TGATAAATAT GCCAGAACTT 
TTAATCTTAG ACGAGCCAAC TGCTGGTGTC GATAAAGAAA ATAAAGAAAT GTTCTTTAAG 
ACACTAAAGA AACTACAAGA AGATCTGGGT ATAACTATAG TCATGATTAC CCATGAGCTT 
AAGGAAATGG AGGATATACA AATGACTAAG ACACAGTATA GGATGAGTGA AGGGAGATTG 
AGTTTATGTT AG
 
Protein sequence
MKAIAINDLS FAYRKENVIK SCNLEVESGE LVLIIGGNGS GKSTLVKLML GELEPDKGSI 
KILGKDIAKY KSYKKIGYVP QVNVVNKIAF PITCLELVAL NLYEDFGFIK IPKKVHYDKA 
RDILIKMGME EFINTPVNEL SGGLAQRAMI AKAMINMPEL LILDEPTAGV DKENKEMFFK 
TLKKLQEDLG ITIVMITHEL KEMEDIQMTK TQYRMSEGRL SLC