Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0477 |
Symbol | |
ID | 8397252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 545256 |
End bp | 546485 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644994834 |
Product | sortase B cell surface sorting signal |
Protein accession | YP_003152245 |
Protein GI | 257065989 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03063] sortase B cell surface sorting signal |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000383377 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA GTAAAAAAGT AAGCTTATCC CTAGCCTTGT TATTGGCTGT TAATTTCATG AGTTTAAGTG CTCCAACAAG CAAGGCAGAT GAATCTATTA ACATAGATGA AGTAGAAAAA GTTCTAGATG AAATTGACAA GGATAAGGTT GAAAGCAAAG TCGATGAGAA TAAAGCTCCT CAAACCGACT CAAGTGAAAG TGCCGATATG GCTTCTTCAA CAAAGGAAAC TGTGGATGAT GAAAGAGTAA AAAAGGCCAA AGAAGAACTC AAGGCCTACC TTGATGGTTT AGATGAAGCT GCTATTGACA ATCCTTCTAT AAAGTTTGAA GGAAATAGCA GACAAGAGCT TAAAAATGCT TTAAAGAGAT CAAGGGACTT GCTTGAAGAT AATAATATCG ATCAAGAAAA GCTTAGTGAA ATTGAAAAAA TTCCTTTTAA GAAAGTAAAT GGAAAAAAAC AAGGACTTTT CAGGGATTTT ACCCACAAGG CCTTGGTTGA CTTTGAAGTT CTTGGTCAAA GAACAAAGAC AAACCCACAC AACAATAAAA ATTATTCATT ACTTAACGAT AATAAGATAT TTATCAAATC TAGTCTAAAA GGACTAAAGA AGGCTAGTGA AAATAAAAAT CAATTTATCA AATTGAATTA TGTAACTGAT GAAGATTACG AGGCGGTCAA TGTAGATGGG ATTAGTTCTT CTACACCAAA ATACAATAAA CAAAAACTTC CTGAAGCTGA TTATAAGATT ATAGAAGTTG ACGGCGGTTA TGTAGTAGAA ATCCTTAATA TGCCTGAAAA TACTAAATTT ATCAAGCCTA TAGTCCTCAA AAAACTTGCC GATGGGACAT TTTTTGAAAA TGGAGATTTA GTTTTTGCCA TAAATGAAAG TCCAAAGCAA GGAGATAAGA CTGAAAATAA GGATAAAACA ACTACAAAGG ATAAAGATTC TACTAAGGAT AAAGATTCTA TTAAAGATAA AGATTCTATT AAAGATAAAG ATTCTATTAA AGATAAAGAT TCTATTAAAG ATAAAGATTC TATTAAAGAT AAAGATTCTA TTAAGGATAA AACAGCTGCA AAGGATAAAA ACTATGCGAA GAAACAAGAA AAGAAGGAAG ATAAACAAGC AGCTCCTAAT TCTAAAACAG GAGTTGAGTC TTCATTAGGG CTTGTTTCCA CTTTATTCGC AAGCTCTTTA GCCTTCCTTT CTATAAAGAG AAAAAAATAA
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Protein sequence | MKISKKVSLS LALLLAVNFM SLSAPTSKAD ESINIDEVEK VLDEIDKDKV ESKVDENKAP QTDSSESADM ASSTKETVDD ERVKKAKEEL KAYLDGLDEA AIDNPSIKFE GNSRQELKNA LKRSRDLLED NNIDQEKLSE IEKIPFKKVN GKKQGLFRDF THKALVDFEV LGQRTKTNPH NNKNYSLLND NKIFIKSSLK GLKKASENKN QFIKLNYVTD EDYEAVNVDG ISSSTPKYNK QKLPEADYKI IEVDGGYVVE ILNMPENTKF IKPIVLKKLA DGTFFENGDL VFAINESPKQ GDKTENKDKT TTKDKDSTKD KDSIKDKDSI KDKDSIKDKD SIKDKDSIKD KDSIKDKTAA KDKNYAKKQE KKEDKQAAPN SKTGVESSLG LVSTLFASSL AFLSIKRKK
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