| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0476 |
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| Symbol | |
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| ID | 8397251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 543917 |
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| End bp | 545035 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644994833 |
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| Product | putative virion core protein |
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| Protein accession | YP_003152244 |
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| Protein GI | 257065988 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000418694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATAG TACAAGTTAT AAAAGGATCT GTTAGTGAAA CGATGACAAG CCAATGGAAG
GAGCTCGTAA CAGTAGGTGA GTTTGAGGAA GATACTGCTG TTAGCCCTGG CTACATCATC
TATGGCGGTG ATAAAAAGTA CAAAAAAGAT GTTGGTTATT TAACAAGCGG ATCAAAAATT
CTTGTTCCCT TAAATACTTG TGCCTTTATA TTTACAAATG GTGGTATAGA AGAGGTTATA
GCAGAACCTG GTGCCTATAT TTACGAAGGA GGGCAAAAGT CCATCTTTAA TATGGACGGA
ATCGCTTCTT CGATTTTAGG CCAACTTAGC GATAGGATTT CTTTTGGAGG AACTAATCCC
AACACTTCAC AAATCGCCTT TCTCAATCTA AGAGAAATTA GAAATATAAA ATTTGGAACC
AGGACTCCTA TTATTTACAA TGACATTTTC TATGGAGTTG ACCTGGAGGT TATAGCTAGG
GGAAATTATT CGATAAAAAT CAATGACCCA GCTACTTTTA TATATGACTT CCTCCCTGCC
AATGCTTCTT CCTATAGTTT TGGCGATTTT AATGCTAGAA GTCAAATTAA TTCCGAGTTC
TTGCAATCTT TTACATCTAG CATTAATTTA TTTTCCAAAG AATTTAGGAT ATCAGAACTT
CCATCCAAGG CAAAGGATAT TGTAAATCTC ATCCTTAAAG ATGAATCTTA TGCTGGTTCT
TGGCTTAAAA GATTCGGCTT TGAATTAGTA AATATTGGAA TTGATAGCAT AGATTTTTCT
GAAAAATCCA AGCTTTTGAT AAATAAGTTC TCCGAAAATA GGATGGATAT GCTCTCTTAT
GAAAATATAT CTCAAACTAG CGCAGATATT AGATACAAGC AAAAAATCGC AGAAGGCATT
AAAGATCATG GCCTAGGCGA TGGAGCTGGC ATGGTTTTTG CCATGAATGA TGTCTTTAAT
CAAGGAGAAA ATAGGAGGGA AGAAAATTCT TCAAAGAAGA CATCCTTATC TATCGACGAG
CAAATAGAAA CACTCACTAA ACTTAAGAAA TTACTAGATA GCGGCATACT CACAGAAGAA
GAATTTGCCC TAAAGAAAAA GGAAATATTA GGACTATAA
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| Protein sequence | MGIVQVIKGS VSETMTSQWK ELVTVGEFEE DTAVSPGYII YGGDKKYKKD VGYLTSGSKI
LVPLNTCAFI FTNGGIEEVI AEPGAYIYEG GQKSIFNMDG IASSILGQLS DRISFGGTNP
NTSQIAFLNL REIRNIKFGT RTPIIYNDIF YGVDLEVIAR GNYSIKINDP ATFIYDFLPA
NASSYSFGDF NARSQINSEF LQSFTSSINL FSKEFRISEL PSKAKDIVNL ILKDESYAGS
WLKRFGFELV NIGIDSIDFS EKSKLLINKF SENRMDMLSY ENISQTSADI RYKQKIAEGI
KDHGLGDGAG MVFAMNDVFN QGENRREENS SKKTSLSIDE QIETLTKLKK LLDSGILTEE
EFALKKKEIL GL
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