Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0476 |
Symbol | |
ID | 8397251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 543917 |
End bp | 545035 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644994833 |
Product | putative virion core protein |
Protein accession | YP_003152244 |
Protein GI | 257065988 |
COG category | [S] Function unknown |
COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000418694 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATAG TACAAGTTAT AAAAGGATCT GTTAGTGAAA CGATGACAAG CCAATGGAAG GAGCTCGTAA CAGTAGGTGA GTTTGAGGAA GATACTGCTG TTAGCCCTGG CTACATCATC TATGGCGGTG ATAAAAAGTA CAAAAAAGAT GTTGGTTATT TAACAAGCGG ATCAAAAATT CTTGTTCCCT TAAATACTTG TGCCTTTATA TTTACAAATG GTGGTATAGA AGAGGTTATA GCAGAACCTG GTGCCTATAT TTACGAAGGA GGGCAAAAGT CCATCTTTAA TATGGACGGA ATCGCTTCTT CGATTTTAGG CCAACTTAGC GATAGGATTT CTTTTGGAGG AACTAATCCC AACACTTCAC AAATCGCCTT TCTCAATCTA AGAGAAATTA GAAATATAAA ATTTGGAACC AGGACTCCTA TTATTTACAA TGACATTTTC TATGGAGTTG ACCTGGAGGT TATAGCTAGG GGAAATTATT CGATAAAAAT CAATGACCCA GCTACTTTTA TATATGACTT CCTCCCTGCC AATGCTTCTT CCTATAGTTT TGGCGATTTT AATGCTAGAA GTCAAATTAA TTCCGAGTTC TTGCAATCTT TTACATCTAG CATTAATTTA TTTTCCAAAG AATTTAGGAT ATCAGAACTT CCATCCAAGG CAAAGGATAT TGTAAATCTC ATCCTTAAAG ATGAATCTTA TGCTGGTTCT TGGCTTAAAA GATTCGGCTT TGAATTAGTA AATATTGGAA TTGATAGCAT AGATTTTTCT GAAAAATCCA AGCTTTTGAT AAATAAGTTC TCCGAAAATA GGATGGATAT GCTCTCTTAT GAAAATATAT CTCAAACTAG CGCAGATATT AGATACAAGC AAAAAATCGC AGAAGGCATT AAAGATCATG GCCTAGGCGA TGGAGCTGGC ATGGTTTTTG CCATGAATGA TGTCTTTAAT CAAGGAGAAA ATAGGAGGGA AGAAAATTCT TCAAAGAAGA CATCCTTATC TATCGACGAG CAAATAGAAA CACTCACTAA ACTTAAGAAA TTACTAGATA GCGGCATACT CACAGAAGAA GAATTTGCCC TAAAGAAAAA GGAAATATTA GGACTATAA
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Protein sequence | MGIVQVIKGS VSETMTSQWK ELVTVGEFEE DTAVSPGYII YGGDKKYKKD VGYLTSGSKI LVPLNTCAFI FTNGGIEEVI AEPGAYIYEG GQKSIFNMDG IASSILGQLS DRISFGGTNP NTSQIAFLNL REIRNIKFGT RTPIIYNDIF YGVDLEVIAR GNYSIKINDP ATFIYDFLPA NASSYSFGDF NARSQINSEF LQSFTSSINL FSKEFRISEL PSKAKDIVNL ILKDESYAGS WLKRFGFELV NIGIDSIDFS EKSKLLINKF SENRMDMLSY ENISQTSADI RYKQKIAEGI KDHGLGDGAG MVFAMNDVFN QGENRREENS SKKTSLSIDE QIETLTKLKK LLDSGILTEE EFALKKKEIL GL
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