Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0473 |
Symbol | |
ID | 8397248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 539973 |
End bp | 541418 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994830 |
Product | PTS system, trehalose-specific IIBC subunit |
Protein accession | YP_003152241 |
Protein GI | 257065985 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAT ATACAGATGA TGCGAAGCTT TTGCATCAAT ATATTGGAGG AGATAGTAAT ATCTCATCTG TTACGCATTG TGTTACCAGG ATGCGTTTTG TACTAAATGA TCCAAAGAAG GCGGATGTAG AAAAAATCGA AGATCTTCCT TCAGTGAAAG GATCTTTCAC CCAGGCTGGC CAATTTCAGG TTATTATTGG AAACGATGTA GATGAGTTTT ATAATGACTT CATGGCTATA TCACACGCCA CAGAAAAGAG CAAGGATGAA GTAAAAAAGG ATGCTGTGAA AAACCAGAAC GCCCTTCAAA GGGTATCTTC AGTCCTTGCG GAAATCTTTG CGCCTTTAAT TCCAGCTATT ATCGTAGGTG GTTTGCTCTT AGGTTTTAGA AATATTCTTG GAGAGATGCC TTTTGATAGT CTTGGAGGAA AGACAATCGT AGAGACTTCT GTTTTTTGGA ATGGGGTAAA TGACTTCTTG TGGCTTATAT GTGAAGCAAT CTTCCACTAC CTACCAGTAG GGATCACCTG GTCTATCACA AGGAAGATGG GTATAACCCA AATTCTAGGA ATTGTTCTAG GTATTTGTTT GATTTCACCT AACCTACTTG CCAATGCATA TTCAATAGCA GGTGGGGGAG AAATTCCTGT CTGGGACTTT GGATTCTTCA CAATAGAAAG AATTGGCTAC CAAGCCCAGG TAATCCCAGC CATGCTTGCA GGCTTCCTCT TGGTTTATCT TGAAAGATTC TTCAAGAAGG TCATCCCTCA AGCAATATCA ATGATTTTTG TTCCCCTATT TTCACTCATA CCAACAGTAC TTCTAGCTCA CTTAGTCCTA GGTCCTATTG GTTGGAAGAT AGGCTCACTA ATCTCTGCAG GAGTATATAA TGGATTGACC TCAGCCTTTA ACTGGCTATT TGCTGCAGTA TTTGGTTTCT TCTATGCGCC ACTTGTTATT ACAGGACTTC ACCATATGAC AAATGCAATC GACCTTCAGC TTGCAAATGA CTTCGGTGGA ACAATCCTTT GGCCAATGAT TGCCCTATCA AACATTGCCC AAGCCTCAGC AGTAGTAGCT ATAATCTACC TACACAGAAA AGACGAGAAG GAGAAACAAA TCTCAGTTCC AGCAGCAATT TCTGCCTATC TTGGAGTTAC AGAGCCTGCT CTTTTTGGTA TCAATATCAA ATACGGCTTC CCATTTATAG CGGGAATGAT TGGATCTGCC CTTGCAGCGG TATTTTCTGT ATCAACTTCA ACCATGGCCT ACAACATAGG TATAGGTGGA CTTCCTGGAA TTCTTTCAAT AATGGGAGGA TCTAGGTTAA ACTTCGCCAT ATCCATGGCT ATTGCAATAG TTGTGCCTGT AGTACTTACT GTAGTATTTG AAAAGAAGAA AATGTTTCAT AACAAGATAG AATTTAAGAC ACCAAGTTTT AGCTAG
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Protein sequence | MGKYTDDAKL LHQYIGGDSN ISSVTHCVTR MRFVLNDPKK ADVEKIEDLP SVKGSFTQAG QFQVIIGNDV DEFYNDFMAI SHATEKSKDE VKKDAVKNQN ALQRVSSVLA EIFAPLIPAI IVGGLLLGFR NILGEMPFDS LGGKTIVETS VFWNGVNDFL WLICEAIFHY LPVGITWSIT RKMGITQILG IVLGICLISP NLLANAYSIA GGGEIPVWDF GFFTIERIGY QAQVIPAMLA GFLLVYLERF FKKVIPQAIS MIFVPLFSLI PTVLLAHLVL GPIGWKIGSL ISAGVYNGLT SAFNWLFAAV FGFFYAPLVI TGLHHMTNAI DLQLANDFGG TILWPMIALS NIAQASAVVA IIYLHRKDEK EKQISVPAAI SAYLGVTEPA LFGINIKYGF PFIAGMIGSA LAAVFSVSTS TMAYNIGIGG LPGILSIMGG SRLNFAISMA IAIVVPVVLT VVFEKKKMFH NKIEFKTPSF S
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