Gene Apre_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0468 
Symbol 
ID8397243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp534262 
End bp535245 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content40% 
IMG OID644994825 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003152236 
Protein GI257065980 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.418458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATG AGAAATTATT AATAGTAAAT AATCTAGTAA AACACTTTAC AGTTTCTACA 
AGTTTTAACA ATACAGTGAA AGTCCACGCA GTCGATGATG TGTCGTTTTT TATAAACAAG
GGAGAGACCC TGGGAATTGT AGGAGAGTCT GGTTGTGGTA AGACAAGTCT GGGAAGGACA
ATCCTTAGAC TACACGAACC GACTAGTGGC CAGATCATAT ATGACGGCGA GACGATCTTT
GATAGAGATA AAGATATTAA GGCTGATATG TATAAGTTTA GGAGGAAAAT GCAAATTATC
TTCCAAGACC CATCAGCTTC CCTAGATCCA AGGATGACAG TGGCTGAAAT TGTTGGAGAG
GCTCTGGATA TCCATGGACT ATACAAAAAA AACAGGAGGG ACAGAATCAA TGAACTGTTA
AGGAAGGTAG GACTAAACGA GGAGCATTCC AATAGATATC CTCACGAGTT TTCGGGAGGC
CAACAGCAAA GGATAGGAAT AGCAAGAGCC CTTGCGGTAG AACCAGAATT TATAGTCTGT
GACGAGCCCA TAAGTGCCCT TGACGTATCG ATCCAAGCAC AAATTGTAAA CATGCTCCAA
GACATGCAAA AAGATAGCGG GCTTACATAT ATGTTCATAG CCCATGACCT ATCGGTAGTC
AAACATATTT CGGATAGGAT AGGAGTTATG TATTTGGGCA AGATGGTAGA GCTTGTAGAT
AGCGAAAGGC TATACGAAAA TCCCCTTCAT CCTTACACCC AATCACTTCT TACAGCAATC
CCAATCCCAG ATCCTAAAAA GACAAGATCT ATGGAAAGGA TTAAGCTAAA AGGTGAGGTC
CCATCTGCAA TCAACCCACC AAAAGGATGT AGATTCCACG AAAGATGCTT GTACGCTACA
GATATTTGTA AAAGTAAAGA ACCTGAATTT AAAGAGTATG AAAGTGGACA CTTCGCAAGT
TGCCACAATA TAGGAGAATT TTAA
 
Protein sequence
MQDEKLLIVN NLVKHFTVST SFNNTVKVHA VDDVSFFINK GETLGIVGES GCGKTSLGRT 
ILRLHEPTSG QIIYDGETIF DRDKDIKADM YKFRRKMQII FQDPSASLDP RMTVAEIVGE
ALDIHGLYKK NRRDRINELL RKVGLNEEHS NRYPHEFSGG QQQRIGIARA LAVEPEFIVC
DEPISALDVS IQAQIVNMLQ DMQKDSGLTY MFIAHDLSVV KHISDRIGVM YLGKMVELVD
SERLYENPLH PYTQSLLTAI PIPDPKKTRS MERIKLKGEV PSAINPPKGC RFHERCLYAT
DICKSKEPEF KEYESGHFAS CHNIGEF