Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0468 |
Symbol | |
ID | 8397243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 534262 |
End bp | 535245 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994825 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003152236 |
Protein GI | 257065980 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.418458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATG AGAAATTATT AATAGTAAAT AATCTAGTAA AACACTTTAC AGTTTCTACA AGTTTTAACA ATACAGTGAA AGTCCACGCA GTCGATGATG TGTCGTTTTT TATAAACAAG GGAGAGACCC TGGGAATTGT AGGAGAGTCT GGTTGTGGTA AGACAAGTCT GGGAAGGACA ATCCTTAGAC TACACGAACC GACTAGTGGC CAGATCATAT ATGACGGCGA GACGATCTTT GATAGAGATA AAGATATTAA GGCTGATATG TATAAGTTTA GGAGGAAAAT GCAAATTATC TTCCAAGACC CATCAGCTTC CCTAGATCCA AGGATGACAG TGGCTGAAAT TGTTGGAGAG GCTCTGGATA TCCATGGACT ATACAAAAAA AACAGGAGGG ACAGAATCAA TGAACTGTTA AGGAAGGTAG GACTAAACGA GGAGCATTCC AATAGATATC CTCACGAGTT TTCGGGAGGC CAACAGCAAA GGATAGGAAT AGCAAGAGCC CTTGCGGTAG AACCAGAATT TATAGTCTGT GACGAGCCCA TAAGTGCCCT TGACGTATCG ATCCAAGCAC AAATTGTAAA CATGCTCCAA GACATGCAAA AAGATAGCGG GCTTACATAT ATGTTCATAG CCCATGACCT ATCGGTAGTC AAACATATTT CGGATAGGAT AGGAGTTATG TATTTGGGCA AGATGGTAGA GCTTGTAGAT AGCGAAAGGC TATACGAAAA TCCCCTTCAT CCTTACACCC AATCACTTCT TACAGCAATC CCAATCCCAG ATCCTAAAAA GACAAGATCT ATGGAAAGGA TTAAGCTAAA AGGTGAGGTC CCATCTGCAA TCAACCCACC AAAAGGATGT AGATTCCACG AAAGATGCTT GTACGCTACA GATATTTGTA AAAGTAAAGA ACCTGAATTT AAAGAGTATG AAAGTGGACA CTTCGCAAGT TGCCACAATA TAGGAGAATT TTAA
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Protein sequence | MQDEKLLIVN NLVKHFTVST SFNNTVKVHA VDDVSFFINK GETLGIVGES GCGKTSLGRT ILRLHEPTSG QIIYDGETIF DRDKDIKADM YKFRRKMQII FQDPSASLDP RMTVAEIVGE ALDIHGLYKK NRRDRINELL RKVGLNEEHS NRYPHEFSGG QQQRIGIARA LAVEPEFIVC DEPISALDVS IQAQIVNMLQ DMQKDSGLTY MFIAHDLSVV KHISDRIGVM YLGKMVELVD SERLYENPLH PYTQSLLTAI PIPDPKKTRS MERIKLKGEV PSAINPPKGC RFHERCLYAT DICKSKEPEF KEYESGHFAS CHNIGEF
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