Gene Apre_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0466 
Symbol 
ID8397241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp532242 
End bp533267 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content37% 
IMG OID644994823 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003152234 
Protein GI257065978 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000165422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA TTTTATCTTT GAATAAAAAA TTAAAATTAG AAGACTTTGA CTTAAGCTCA 
GATGATTTTG ATCTAGCAAG TGAAAGTCAA AAGGAAAATT TCATAAGTAA AGCTCCATCA 
ACTTCCTACT TCCAAGATGC GAAGAGGAGA CTAAAGGCAA ACAAGGTAGC TATGGTTTCC 
CTAGCCTTTT TGATAATCAT TTTTATCTTT GCCTTTCTAG GACCTTTATT TGTAGAAGGA 
GATTATACGA CTCAGTTTAG GGGAGATGAG AATTTATTTC CTTGCTGGAA ATATCCTTTT 
GGTACAGACA AGCTAGGTAG AAATATAATG GTTCGTACTA TGTATGGAAC AAGAGTTTCT 
CTCATAGTTG GAGTCTTTGC TTCCTTGATT GTTTTAATCA TTGGTACGAT TTACGGTTCT 
ATTTCAGGAT ATTTTGGAGG AAAAGTAGAT GCGGTAATGA TGAGAATCCT AGATTTAATT 
TATTCTATAC CAGATGTATT GGTAGTAATA TTATTATCTA TAGGAATATC TCAACCCCTT 
AAATCATATG TTAACTCATC TACTTCGGAT TTTGCCAAGA AAATAGGAGT CCTAGGACCG 
GCCCTTATAT CGATATTTAT TGCCTTTGCC CTACTCTACT GGGTGGGAAC GGCAAGAATT 
ATAAGAGGAC AAGTGCTAAT GCTTAAGAAA CAAGAGTTCG TAACAGCAGT TGAAGCCCTG 
GGAGGATCTA AGAGAAGGGT AATAAGAAGG CACCTTTTTC CAAACTGTAT AGGCCAGGTC 
ATAGTAATGA CAGCCATGCA AATTCCTTCT GCTATATTCC TAGAGTCCTT CCTATCATTC 
TTAGGAATAG GAGTTTCAGT TCCGATGACT TCTCTTGGAG CCCTTGCAGC GGATGCCTTG 
GGAGGAATTT ACTCCTATGC TTATAGGCTA ATCATTCCAT CATTGATATT ATCCCTTATG 
ATTTTATCCT TGAACTTGTT CGCAGATGGA CTGAGAGATG CCCTAGATCC AAGGCTTAAA 
AAGTAG
 
Protein sequence
MDNILSLNKK LKLEDFDLSS DDFDLASESQ KENFISKAPS TSYFQDAKRR LKANKVAMVS 
LAFLIIIFIF AFLGPLFVEG DYTTQFRGDE NLFPCWKYPF GTDKLGRNIM VRTMYGTRVS 
LIVGVFASLI VLIIGTIYGS ISGYFGGKVD AVMMRILDLI YSIPDVLVVI LLSIGISQPL 
KSYVNSSTSD FAKKIGVLGP ALISIFIAFA LLYWVGTARI IRGQVLMLKK QEFVTAVEAL 
GGSKRRVIRR HLFPNCIGQV IVMTAMQIPS AIFLESFLSF LGIGVSVPMT SLGALAADAL 
GGIYSYAYRL IIPSLILSLM ILSLNLFADG LRDALDPRLK K