Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0465 |
Symbol | |
ID | 8397240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 531311 |
End bp | 532240 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644994822 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003152233 |
Protein GI | 257065977 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000243016 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGT ACATAATTAA AAGAATTTTA CAAGCTGTGG CAGTTTTGCT TCTTGTAACT TGTATAACCT TTTTCCTGAT GAAATTAGTT CCAGGATCAC CATTTGCAAG TGAAAAAATG CAATCACCAG AAGTACTAGA AGCTCTAAAC AAAAAGTACG GCTTGGATGA ACCTTATTTG GTTCAACTTA AGAAATTCAT AGTAAATGCA GCCAAGGGAG AGTTTGGAGT ATCTTTGAAA ATGCAAAAAG ACAGACCTGT TATTGATATT ATTAAAGAGA TGCTTCCAAC TAGTGTAAAG CTAGGGCTAA TTGCTCTCTT TTGGGCGACT CTTGTAGGAG TTCCCTTGGG ATCTCTTGCA GCCTATCATA GGGACGAGGG CCTAGATTCC TTCCTAAGAG TTCTAACTAC TATAGGGATC TCTGCACCAG GCTTTGTTGT AGCGACACTT TTGCTTTTGC TCTTTGGAGT TAAGCTAAAA GTCCTACCTA CCATGGGTCT TGATAGCTGG AAATCTTACA TAATGCCTTG TTTTTCTCTA GGATTTTATC CTATGTGTTA TATAGCAAGA CTTTCAAGAT CATCTATGTT AGATGCTATC GGCCAAGATT ATATAAGGAC TGCTAGAGCT AAGGGAGTTT CAGAAAGGAA GGTTTTGTTT AAGCACGCTT TAAAGAATGC TTTTATACCA GTTCTTACCT ACCTAGGACC TCTCACAGCA GGAATTATTA CAGGTTCTAT GGTGGTTGAG TCAGTCTTTT CTGTCCAAGG ACTTGGAAGA TATTTTATAA ACTCAGTACT TAATAGAGAC TATCCAATAA TCATGGCGAC AACATTGTTT TTTGCCTTTA TGGTAATAGT GATGAATCTA GTAGTAGATA TACTCTATAC CTTTATAGAT CCAAGGATAG ATTTGAGTAA GGGAGAATGA
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Protein sequence | MFKYIIKRIL QAVAVLLLVT CITFFLMKLV PGSPFASEKM QSPEVLEALN KKYGLDEPYL VQLKKFIVNA AKGEFGVSLK MQKDRPVIDI IKEMLPTSVK LGLIALFWAT LVGVPLGSLA AYHRDEGLDS FLRVLTTIGI SAPGFVVATL LLLLFGVKLK VLPTMGLDSW KSYIMPCFSL GFYPMCYIAR LSRSSMLDAI GQDYIRTARA KGVSERKVLF KHALKNAFIP VLTYLGPLTA GIITGSMVVE SVFSVQGLGR YFINSVLNRD YPIIMATTLF FAFMVIVMNL VVDILYTFID PRIDLSKGE
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