Gene Apre_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0462 
Symbol 
ID8397237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp527154 
End bp527816 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID644994819 
ProductABC transporter related 
Protein accessionYP_003152230 
Protein GI257065974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGC CAATTTTAAA GGTAGAAAAT CTTAGCTTTG CCTACGACAA AGATCTAATT 
CTTGATGGTA TCAATTTTGA AATAAAAGAG GGAGATTTCG TGGCCCTTGT TGGGGCAAAT 
GGTGTTGGAA AATCTACTCT CCTAAAGGTA ATTTTGGGAG AGCTAAAGGC TAAGGAAGGT 
CATATAGAAA TATTTTCTGA TGACATAAGA AAGGATAAGC ATTTTAGGGA CCTAGCTTAT 
ATTTCTCAAA ATGCCGTTAC TTCCTATAGG AATTTCCCGA CAACTATTGA AGAAGCGATT 
AAAATCCACA TTTCTTACCA AAAAAAGAAA ATAGAGCCAA AAGATTTGAT GGAAAAGCTA 
GGTCTTTGGG ATCATAGAAA GAAGGCCCTA AGCGATTTGT CAGGTGGACA GATTCAAAGA 
TTTGCTATAA GCCTAGCCCT AATAAAGGAT GCAAGTTTAA TCCTTTTAGA TGAACCAACG 
ACTGGAATTG ATGAGGATTT TGCTAATGAA TTTTTTAAAA GCTTGATCGC TCTTAAAAAA 
AGTGGCAAGA CCATTTTGAT AATTACCCAC CAGCTTGATA TGGCAGCTGT CTTCGTAGAT 
TATGCTATTA GAATAAAGAA GGGTAAAGAA AAGATTATAA GCAAAGATGA GCTTAGTTTG 
TGA
 
Protein sequence
MNKPILKVEN LSFAYDKDLI LDGINFEIKE GDFVALVGAN GVGKSTLLKV ILGELKAKEG 
HIEIFSDDIR KDKHFRDLAY ISQNAVTSYR NFPTTIEEAI KIHISYQKKK IEPKDLMEKL 
GLWDHRKKAL SDLSGGQIQR FAISLALIKD ASLILLDEPT TGIDEDFANE FFKSLIALKK 
SGKTILIITH QLDMAAVFVD YAIRIKKGKE KIISKDELSL