| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0447 |
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| Symbol | |
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| ID | 8397222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 507032 |
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| End bp | 510598 |
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| Gene Length | 3567 bp |
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| Protein Length | 1188 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644994804 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003152215 |
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| Protein GI | 257065959 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT TAAACCAATT TGATGGGATG AGGATGAAGA TCGCATCCGC TGAAAAAATC
AGATCATGGT CTCACGGCGA AGTTAAAAAG CCAGAGACAA TCAACTATAG AACCCTAAAA
CCAGAAAAGG ACGGACTTTT CTGTGAGAAA ATATTTGGAC CAACCAAAGA CTACGAATGT
TCTTGTGGTA AATACAAGAG AATCAGATAC AAGGGCGTAG TTTGTGAAAA GTGTGGGGTA
GAAGTGACAA AGTCCAAAGT ACGTCGTGAA AGAATGGGCC ATATCGAGCT TGCAGCTCCT
GTAAGCCACA TTTGGTACTT CAAGGGAATA CCATCCAAGA TGGGACTTCT CCTTGACATG
AGCCCAAGAG TACTAGAGAA AATCCTATAC TTTGCTTCAT ATGTTGTAAT CAACCCTGGT
TCAACAGACC TTATGGAAAA GCAAGAAATC TCTGAAAATG AATACCAAGA CGTCCTAGAA
GCTTATCCAG ACGATACAGA ATTTAAGGCT GCTATGGGAG CTGAAGCTGT AAAAGAGCTT
CTAGCTAATG TAGATCTTAA GAGAGAATAC GAGCTTCTCC TAAAGGAACT TGACGAATCA
ACAGGCCAAA AGAAGGTAAG AGTTTCAAGA AGACTAGAAG TAGTAGATGC CTTCCTTACA
AGCGGCAACA AGCCAGAATG GATGATTCTA GATGTCCTTC CAGTAATGCC ACCAGAATTA
AGACCAATGG TCCAACTTGA AGGTGGAAGA TTTGCAACAA GTGACTTAAA TGACCTTTAC
AGACGTGTTA TCAATAGAAA CAACAGACTA AAGAGACTCC TAGATATAGG AGCTCCTGAA
ATCATCGTTC GTAACGAGAA GAGAATGCTT CAAGAAGCAG TCGACGCCCT AATCGATAAC
GGAAGACGTG GACGAGCTGT AACTGGAGCA TCTAACAGAA ACATGAAGTC CCTATCTGAC
TTACTTAAAG GAAAGAGCGG TAGATTTAGA CAAAACCTAC TAGGTAAGAG AGTTGACTAC
TCAGGTCGTT CTGTAATCGT AGTAGGACCT GACCTTAAGT TTAACCAATG TGGACTTCCA
CAAGAGATGG CCCTTGAGCT TTTCAAACCA TTTATCATGA ACAAGGTAGT AGATTGTGGT
ATGGCTCACA ACCTAAAATC TGCCAAGAAA ATGGTAGAGA AAAAAGACCC AAGAGTCTAT
GAAATCCTTG AAGAAGTAAT CAAAGACCAC CCAGTTTTAC TAAACCGTGC CCCTACACTT
CACAGACTTG GTATCCAAGC CTTTGAGCCA AAGCTTGTAG CAGGTAAGGC TATGAAGCTT
CATCCACTGG CATGTAACGC CTTCAACGCC GACTTCGACG GTGACCAAAT GGCTATCCAC
TTGCCACTAT CTAATGAAGC ACAAATCGAA GCAAGACTAC TTATGATGTC AACTAACAAC
ATCTTAGGTC TTAAAGATGG TAAGCCAATT ACCACTCCTT CCCAAGATAT GGTACTAGGT
GCCTATTACC TAACTACTAT CAAGAAGGAA GCTAAGGGTG AGAATATGAC CTTCGAGTCT
TACGATGAGA TGATGAAGGC CCTAGAAGCA GGCTATGTAG AATATCAAGC CAAAGTTAAG
GTAAGAGTTA AGAAGAGCAA AGACGATCCA GGTAAAATCG TAGAATCTTC TGTAGGTAGA
TTTATCTATA ACTCAGGTAT TCCACAAGAC TTGGGTTATG TAAATAGAAA AGAAGATCCA
TATTCACTAG AGATTGACAC AATAGTAGAT TCTGGAACTC TAAAAGATAT AGTCGATAAA
TGCTTTAGAA AGCACGGAAA CATAAAGACT GCAGAAGTAC TAGACTACAT CAAACAAACA
GGATATAAAT ATTCAACCCT ATCAGGACTT ACAGTATCCA TGTCAGACGT AAATATTCCA
AAAGAAAAAT GGGATCTTAT TGCTCATGCA GATGCTGAAG TTGATAGATA CGATAAGCTC
TACAGAAGAG GTCTAATAAC AGATCAAGAA AGATATGAAA AAGTTATAGA CATCTGGGGT
AAGACTACAA ATGATGTAAC TGACGCCCTT CTTACAGAGC TTAAGTCAGA TAATAACATC
AAGATCTTTG CCGACTCCGG TGCCCGTGGT TCTACTAACC AAATCAGACA GCTAGGCGGA
ATGCGTGGAC TTATGAGTCA GGCCGATGGT AAGATCATAG AAATTCCTAT CAAGGCGAAC
TTTAGGGAAG GACTTTCAGT ACAAGAGTAC TTTATCTCAA CCCACGGTTC ACGTAAGGGT
CTAACAGATA CCGCCCTAAG AACAGCCGAC TCAGGATACC TAACTAGAAG GATGGTAGAT
ATTTCCCAAG ACGTTATAGT TACAGAAGAT GACTGCCATA CAGATGGATA TGTTGTAGCT
CACGAGTTTA AGGACGGAAA CGAACTTATA GAAAACCTAC AAACAAGAAT TATCGGTAGA
ACATCTTTCG AAGAAATCAA AGATGAAAGT GGCGAAGTTA TAGTTCACAA GGATGAGCTA
ATAGACGAGG ACATGGCTGA TAAAATAATT GATGCAGGTA TCAAGGAAGT TAAGCTTCGT
TCAGTTCTCG AATGTAAGGC AAAACATGGA GTATGTGCAG CATGTTATGG TAGAAACCTT
GCTACAGGCA AACACGTAAA TGCAGGTGAG GCTGTAGGAA TCATCGCTGC CCAATCAATC
GGTGAGCCTG GTACTCAGCT AACCATGAGA ACCTTCCACT CCGGTGGTAT CGCAGGCGTT
GGAATCACCC AAGGTCTTCC AAGAGTTGAG GAGTTATTCG AAGCGAGAAA GCCAAAAGGA
CTTGCCTACA TCGCAGAAAA CTCCGGTACA GTAACTCTTA TCCAAAACGA AAAGAAGACA
GACGTAGAAA TCCTATCAGA CGACGGATTT GCCAAGAAAT ACAACATCCC ATTCGGATCT
AGAATCCTTG TAAGAGATGG CGATGTGGTA AGAAAGGGTG ACCAACTAAC AGAAGGATCC
CTTGATCCAC ACGATGTATT GAAGGTTCTA GGAAAAGTCG GAGTCCAAGA CTACATTACA
AAGGAAGTCC AAAAAGTATA CAGACTTCAA GGTGTAGAGA TCGACGATAG ACACATAGAA
GTAATCGCTC GTCAAATGCT TAAGAAAGTT AAGATTGAAG AGGCTGGAGA TACAGAGTTC
CTACCAGGAT CCCTTCAAGA TAGACGTGAA GTCGATATAG AAAACGAAAA AATGATAGAA
GAAGGAAAAG AAGCAGCAAC ATATAGCCAA GAGCTCCTTG GAATCACCAA GGCTTCCCTT
GCTACAGAAA GCTGGCTATC AGCAGCATCC TTCCAAGAAA CAACCAGAGT CCTAACAGAT
GCCTCAATCA AGGGCAAGGT CGATGACCTC AAGGGACTTA AGGAAAATAT CATCATAGGT
AAGCTAATCC CAGCAGGTAC GGGACTTAAG ACTTACAATG ATGTAGAAAT CGACTACGAA
ACAAAAGAAG CAGAAGATGC ACAAATAGCA ATGAACATAG AAGCTATCGA AAAAGAAGCT
GAAAGCGAAG AAGCTATACA AAAATAA
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| Protein sequence | MSELNQFDGM RMKIASAEKI RSWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTKDYEC
SCGKYKRIRY KGVVCEKCGV EVTKSKVRRE RMGHIELAAP VSHIWYFKGI PSKMGLLLDM
SPRVLEKILY FASYVVINPG STDLMEKQEI SENEYQDVLE AYPDDTEFKA AMGAEAVKEL
LANVDLKREY ELLLKELDES TGQKKVRVSR RLEVVDAFLT SGNKPEWMIL DVLPVMPPEL
RPMVQLEGGR FATSDLNDLY RRVINRNNRL KRLLDIGAPE IIVRNEKRML QEAVDALIDN
GRRGRAVTGA SNRNMKSLSD LLKGKSGRFR QNLLGKRVDY SGRSVIVVGP DLKFNQCGLP
QEMALELFKP FIMNKVVDCG MAHNLKSAKK MVEKKDPRVY EILEEVIKDH PVLLNRAPTL
HRLGIQAFEP KLVAGKAMKL HPLACNAFNA DFDGDQMAIH LPLSNEAQIE ARLLMMSTNN
ILGLKDGKPI TTPSQDMVLG AYYLTTIKKE AKGENMTFES YDEMMKALEA GYVEYQAKVK
VRVKKSKDDP GKIVESSVGR FIYNSGIPQD LGYVNRKEDP YSLEIDTIVD SGTLKDIVDK
CFRKHGNIKT AEVLDYIKQT GYKYSTLSGL TVSMSDVNIP KEKWDLIAHA DAEVDRYDKL
YRRGLITDQE RYEKVIDIWG KTTNDVTDAL LTELKSDNNI KIFADSGARG STNQIRQLGG
MRGLMSQADG KIIEIPIKAN FREGLSVQEY FISTHGSRKG LTDTALRTAD SGYLTRRMVD
ISQDVIVTED DCHTDGYVVA HEFKDGNELI ENLQTRIIGR TSFEEIKDES GEVIVHKDEL
IDEDMADKII DAGIKEVKLR SVLECKAKHG VCAACYGRNL ATGKHVNAGE AVGIIAAQSI
GEPGTQLTMR TFHSGGIAGV GITQGLPRVE ELFEARKPKG LAYIAENSGT VTLIQNEKKT
DVEILSDDGF AKKYNIPFGS RILVRDGDVV RKGDQLTEGS LDPHDVLKVL GKVGVQDYIT
KEVQKVYRLQ GVEIDDRHIE VIARQMLKKV KIEEAGDTEF LPGSLQDRRE VDIENEKMIE
EGKEAATYSQ ELLGITKASL ATESWLSAAS FQETTRVLTD ASIKGKVDDL KGLKENIIIG
KLIPAGTGLK TYNDVEIDYE TKEAEDAQIA MNIEAIEKEA ESEEAIQK
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