| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0446 |
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| Symbol | |
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| ID | 8397221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 503316 |
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| End bp | 507023 |
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| Gene Length | 3708 bp |
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| Protein Length | 1235 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644994803 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003152214 |
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| Protein GI | 257065958 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAAT TCCATGAACA AATGTATGGA AGAACTAAGA GAAAGAGTTT TTCCAAATTT
CCTCAAGTAT TAGATTTACC AAATTTATTG AAAGTTCAAA AAGATTCTTA CGAATGGTTC
CTTAAGGAAG GTTTGGGAGA AATCCTAGAA GATATTTCTC CAATTGAAGA CTATAATGGC
AACCTAATTC TAGAATTTAT CGGTTATGAA TTTGATGAAG AAACAAAATA TTCAGTAAAA
GAATCCAAAT ACAAGGATGC GACCTACGCA AGAGATTTAA AGGTTAAGGC AAGACTTATA
AATAAGGAAA CAGAAGAAGT TAAAGAGCAA GAAGTCTTTA TGGGAGACTT CCCAATGATG
ACAGATTCTG CTACCTTTGT TATAAATGGT GCCGAAAGAG TTATAGTAAG CCAGTTAGTT
AGATCTCCTG GTGTTTATTA TGCAGAAGAA ACTGACAAGA GTGGGGATAA GATGTATTCT
TCAACTGTCA TCCCTAACCG TGGTGCGTGG ATTGAGTTTG ATACAGATGC AAGCCACACA
GTAAATGTTA GACTTGATAG AACAAGAAAA CTACCTGCAA CAACTCTCGT TCGTGCGCTT
TTATTCGAAA CAGACGAAGA AATCATCAAC GCTATCGGAG ATACCAAACA TTTGAGAAAT
ACCCTAGAGA AGGAAAACTC AGAGACTGCA GATGAAGCTT TGATAGAAAT TTATAGAAAA
TTAAAACCAG GGGACCCTGC AAGTGTTGAA TCTGCAACAA ACTTAATCAA CAATCTCCTC
TTCGATGATA GAAGATACGA CCTTGCTAAG GTTGGTAGAT ACAAATACAA CCTTAAGCTT
GCCCTAGCAG ACAGAATCGA AGGACTTGTA TCTAAGGATG ATGTTATAGA TCCAGAAACT
GGAGAAGTTT TCGTATCAGC AGGAGAAATT ATCGACGAAG AAACAGCCAA AGCTATAGAA
AATGCTGGTA TTGTTACAGT TGATGTAATA AAAAAAGACG AATACGAAGA AGATAAGACC
CTTAGGGTAG TTGGAAATAA CTTTGTAGAC TTTAACTCAT TTGAAGAGCT AAAAGATGTC
GATGTTACAG TTGATGACTT CAGTGAAAAA GTATACTTCC CAGTTATGAA AGAGATAATC
GAAGAGGCAA ATAGCCCAGA AGAAATCAAA TCTCTAATGG AGAGAAGGAA GAAAGAGCTT
TGCCCAAAAC ACATCACTAA GGCTGATATA CTCGCTATAG TTAACTACCA ATTCAACCTC
TTTGAAGGAA TTGGCTATGT AGACGATATC GACCACTTAG GTAATAGACG TGTTAGAGGA
GTTGGAGAAC TTCTACAAAA CCAATTTAGA GTAGGGCTTG CTAGAATGGA AAGAGTTGTT
CGTGAAAGAA TGACAACCCA AGATCCTGAC CTTGCAACTC CACAAGGCTT AATCAATATC
AAGCCAGTAA CAGCTGTAAT CAAAGAATTC TTTGGTTCAT CCCAACTTTC CCAATTCATG
GACCAAACCA ACCCAATGAG TGAGCTAACT CATAAGAGAA GATTATCTGC TCTTGGACCA
GGTGGTTTGT CAAGAGATAG AGCTGGTGTT GAGGTCCGTG ACGTGCACGA TTCTCACTAC
GGAAGAATCT GTCCAATAGA GACTCCAGAA GGACCAAATA TCGGACTAAT CACTTCCCTT
ACAACATACG CAAGAGTAAA CAAATATGGA TTTATAGAAA CTCCTTACAG ACTTGTTAAG
GAAGGTGGTT ATGTAACTGA TGAGATTGAC TACCTAACAG CAGACATAGA AGATAACTTT
ATCATAGCCC AAGCCAACGA GCCACTTGAT GAAAATGATA GATTCGTAAA CGAAAGAGTA
TCAGGACGTG GTATTAAGGG TGAGAATGAT ATCTACCCAA GAGAGAAAAT CCAATACATG
GACGTTTCTC CTCAACAGAT CGTATCTGTT GGAGCAAGCC TCATACCATT CCTTGAAAAC
GACGACTCAA CCCGTGCCCT CATGGGTGCC AACATGCAAC GTCAGGCAGT TCCACTTATT
AAGACAGAAG CTCCAATAGT TGCGACAGGT ATCGAGCACA GAGCAGCTAA GGATTCAGGT
GTTTGTGTTG TATCTAGGTC AAAGGGTGAA GTTGTTTATG TCGGAGATGA TCACATCAAG
GTCAAAAGGG CTAGCGATGG AGAAATCGAA GACTACGAGT TACTCAAATT TGAAAGAGCC
AACCAAGGAA CAACCATCAA CCAAAGACCA ATTGTTAAAA GAGGAGATAA GGTTGAGGCT
AACGAAATCC TTGCAGATGG ACCATCTACA GACAATGGAG AGCTAGCCCT AGGTAAAAAT
ATCCTCATAG CCTTTACAAC ATGGGAAGGA TACAACTTCG AGGATGCTAT GCTTCTTAAT
GAAGAGCTTG TAATGGACGA TGTCCTTACC TCAGTTCACA TAGAAGAGCA TGAGTGTGAA
GCGAGAGAAA CTAAGCTTGG AGCAGAAGAG ATCACCAAGG ATATACCAAA TGTCGGCGAA
GATATGAAAA AAGATCTCGA CGAAAATGGT ATTATCAGAA TCGGTGCAGA AGTTAAAAGC
GGAGATATCC TTGTAGGTAA GGTATCACCA AAGGGAGAGA CTGAACTATC TCCAGAAGAA
AGACTTCTAC GTGCAATCTT CGGTGAAAAA GCAAGAGAGG TACGTGATAC TTCCCTTAAG
GTTCCACACG GTGAAAGCGG AATAGTAGTT GATGTCAAAG AATACAACAA GAAAGATGGA
GACGAACTTG CTCCAGGTGT AAACAAGGTA ATAAGAGTAT ATGTCGCTGC CAAAAGAAAG
ATCATGGTGG GAGATAAGAT GTGCGGTCGT CATGGTAACA AGGGTGTCGT TTCAAGGATT
CTTCCAAGAG AAGATATGCC ATTCTTACCA GACGGAACAC CTCTACAAAT CTGCCTAAAC
CCACTTGGTA TCCCAAGCCG TATGAACCTT GGACAGGTAC TTGAAGTCCA CATGGGTCTT
GCAGCAAGAA CAATGGGCTG GAAGATTGCT ACACCAGTAT TTGATGGTGC ACTTGATACA
GAAATCGAAG AAGTCCTAGA AGAAGCTAAA AAGACAGCTC CATATGTAAA TAAGACAGGA
AAAATAACTC TTCGTGATGG TAGAACTGGT CTTCCATTCC AAAACCCAGT AACAGTTGGA
GTAATGTATA TGCTTAAGCT CCACCACATG GTAGAAGAGA AAATCCACGC AAGATCTATT
GGACCTTACT CACTAGTAAC CCAACAACCT CTTGGTGGTA AGGCACAATT CGGTGGACAA
AGATTCGGAG AGATGGAAGT TTGGGCCCTA GAAGCCTACG GTGCAAGCCA CACCCTCCAA
GAAATCCTAA CAGTTAAGTC AGATGACGTT ACCGGAAGAG TTAAGACCTA TGAATCAATC
GTTAAGGGAG AAAATATTCC TGAACCAGGT ACACCAGAAT CCTTCAAGGT TCTTGTAAAG
GAACTTCAAT CCCTTGCCCT CGACGTAGAG CTACTCGATG AAGAAGGCGA AGTAATCGAA
CTTAAGGAGA ATATCGACGA ACAAGATAGA TTTTCTCAAG TAGATAAGAT CGATGCTTCT
AAGGTTAAGA GTCTAACTAG AGCCCTAAAC AAGGACCCAG AGACAAAGAC TAAGGTTACA
AGCAAGGCAA AAAGCGAAGA TAGTGACGAT GAGAATATAG AAGAATAG
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| Protein sequence | MAQFHEQMYG RTKRKSFSKF PQVLDLPNLL KVQKDSYEWF LKEGLGEILE DISPIEDYNG
NLILEFIGYE FDEETKYSVK ESKYKDATYA RDLKVKARLI NKETEEVKEQ EVFMGDFPMM
TDSATFVING AERVIVSQLV RSPGVYYAEE TDKSGDKMYS STVIPNRGAW IEFDTDASHT
VNVRLDRTRK LPATTLVRAL LFETDEEIIN AIGDTKHLRN TLEKENSETA DEALIEIYRK
LKPGDPASVE SATNLINNLL FDDRRYDLAK VGRYKYNLKL ALADRIEGLV SKDDVIDPET
GEVFVSAGEI IDEETAKAIE NAGIVTVDVI KKDEYEEDKT LRVVGNNFVD FNSFEELKDV
DVTVDDFSEK VYFPVMKEII EEANSPEEIK SLMERRKKEL CPKHITKADI LAIVNYQFNL
FEGIGYVDDI DHLGNRRVRG VGELLQNQFR VGLARMERVV RERMTTQDPD LATPQGLINI
KPVTAVIKEF FGSSQLSQFM DQTNPMSELT HKRRLSALGP GGLSRDRAGV EVRDVHDSHY
GRICPIETPE GPNIGLITSL TTYARVNKYG FIETPYRLVK EGGYVTDEID YLTADIEDNF
IIAQANEPLD ENDRFVNERV SGRGIKGEND IYPREKIQYM DVSPQQIVSV GASLIPFLEN
DDSTRALMGA NMQRQAVPLI KTEAPIVATG IEHRAAKDSG VCVVSRSKGE VVYVGDDHIK
VKRASDGEIE DYELLKFERA NQGTTINQRP IVKRGDKVEA NEILADGPST DNGELALGKN
ILIAFTTWEG YNFEDAMLLN EELVMDDVLT SVHIEEHECE ARETKLGAEE ITKDIPNVGE
DMKKDLDENG IIRIGAEVKS GDILVGKVSP KGETELSPEE RLLRAIFGEK AREVRDTSLK
VPHGESGIVV DVKEYNKKDG DELAPGVNKV IRVYVAAKRK IMVGDKMCGR HGNKGVVSRI
LPREDMPFLP DGTPLQICLN PLGIPSRMNL GQVLEVHMGL AARTMGWKIA TPVFDGALDT
EIEEVLEEAK KTAPYVNKTG KITLRDGRTG LPFQNPVTVG VMYMLKLHHM VEEKIHARSI
GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGASHTLQ EILTVKSDDV TGRVKTYESI
VKGENIPEPG TPESFKVLVK ELQSLALDVE LLDEEGEVIE LKENIDEQDR FSQVDKIDAS
KVKSLTRALN KDPETKTKVT SKAKSEDSDD ENIEE
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