Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0427 |
Symbol | |
ID | 8397202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 482376 |
End bp | 483716 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644994784 |
Product | MATE efflux family protein |
Protein accession | YP_003152195 |
Protein GI | 257065939 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.744275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAGAA AAGATTATTG GAAAAAATCA CTTTCAATTG CCTGGCCTGC CCTATTGGAA TTCTTTTTTA TATCCATAGC TGATATAATA GATACCTTTA TGGTATCTGG TATGGGTCCA AGTGCTGTTG CAGCCATAGG TCTTACTACC CAGCCGAAAT TTATAGCCCT TACCATATTC TTCTCCATAA ATGCAGCCGT ATCGGCCCTT GTTGCGAGAA GACAGGGAGA AGGAGACAGG CAAGAAGCCA ACAAGACTCT TCTAACGGCT ATCTATATAG TGATAGCCTT CGTAATCCTA GTAGACCTTG TGATGATGCC CTTCCTATCC CCAATCCTTA AGTTTGCTGG ATCCAATCCT GAAACTCACG AGCTTTCTAT AGCTTACTTT CAAATAATAA TGGGAGGAAT TATCTTTAAT GCCCTAGCCA TGGTCATAAA TGCTGGCCAC AGAGGTTGCG GCAATACACA AATCGCCTTC GTATCAAACC TAGTTAGCTC TGTCGTTAAT ATTAGCTTTA ACTACCTACT AATCTACGGA AACTTTGGCT TTCCTGCCCT AGGCATAAGG GGAGCTGCTA TTGCGACAGT CCTAGGAACT GTGGTGGCAA GTATCATGTG TACTATTTCT CTAATGAGAA AATCTTCCTA CCTAAACTTC AATCAGTTTG TAAGAGTTAA GTTTTCCTTT AGCAAAAAAA TCTCCAAGTC TATAGCAAGC CTTGGCTCAA ATATATTTGT AGAAAATGTC TCAGCAAGAA TCGGCTTTCT TGTTACAGCC ATTACCGCAG CAAGTCTTGG AACAGAAATA TTTGCAGCCC ACAATGTAGG AATGAACCTA CTATCCCTAA CCTTCTCCTT GGGTAATGGT ATGCAAGTAG CAGCCATCGC CCTTTCGGGT AATGCTCTAG GAGCAGAAGA TAAAGAAGGA GCTAAGACTT ACGGCAAGGT CTGCCAAGAA ATCGGCTTTG CCCTATCAGT AATAGTTTCA ATCATACTGA TATTTTTCGG AAGACATATC TTCGGACTCT TCTTCAAAGA TCCGGAAATA ATAGAATACG GTGTGATTAT TACAAGGTTC CTTACAGTAA TAGTCCTCCT ACAAATCTCC CAAACAATCT ACGGAGGATG CCTCAGAGCG GCAGGAGATG TCAAGTACAC CCTCTTTGTA GCCCTATTAT CTGTAACATT CATAAGAAGT GCAGTCACCC TACTTGCAGT AAATGTCCTA AGTCTGGGCA TCATGGGAAT CTGGCTAGGA ATCCTGTCAG ATCAGGCATC AAGGTTTATT TGCCTAAGAC GAAGATTCCA TCAAGGAAAC TGGGTCAACA AGAAAATATA A
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Protein sequence | MQRKDYWKKS LSIAWPALLE FFFISIADII DTFMVSGMGP SAVAAIGLTT QPKFIALTIF FSINAAVSAL VARRQGEGDR QEANKTLLTA IYIVIAFVIL VDLVMMPFLS PILKFAGSNP ETHELSIAYF QIIMGGIIFN ALAMVINAGH RGCGNTQIAF VSNLVSSVVN ISFNYLLIYG NFGFPALGIR GAAIATVLGT VVASIMCTIS LMRKSSYLNF NQFVRVKFSF SKKISKSIAS LGSNIFVENV SARIGFLVTA ITAASLGTEI FAAHNVGMNL LSLTFSLGNG MQVAAIALSG NALGAEDKEG AKTYGKVCQE IGFALSVIVS IILIFFGRHI FGLFFKDPEI IEYGVIITRF LTVIVLLQIS QTIYGGCLRA AGDVKYTLFV ALLSVTFIRS AVTLLAVNVL SLGIMGIWLG ILSDQASRFI CLRRRFHQGN WVNKKI
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